数字农科院2.0

The pan-NLRome and diversity of Watkins wheat provide genetic resources for improving disease resistance and adaptation

文献类型: 外文期刊

作者: Weidong Ning;Zhiye Ye;Shaojie Ye;Wenfei Xian;Tanrui Zou;Zijian Liu;Wenzheng Wang;Baizhi Chen;Weibo Xie;Shifeng Cheng;Bo Song

作者机构:

关键词: GWAS;NLR gene pair;pan-NLRome;wheat

期刊名称: Plant Communications

ISSN:

年卷期: 2025 年 6 卷 12 期

页码:

收录情况: SCIE(2025版) ; ; CSCD(2025-2026年度)

摘要: The nucleotide-binding domain leucine-rich repeat (NLR) receptor proteins play pivotal roles in plant disease resistance due to their extensive genetic diversity driven by long-term co-evolution with pathogens. In this study, we present a comprehensive wheat pan-NLRome containing 8056 NLR genes, which display remarkable diversity in gene structure, nucleotide variation, and presence-absence polymorphisms across the A.E. Watkins landrace collection. Comparative analysis between the landraces and modern cultivars revealed that 1316 NLRs were gained, and 1179 NLRs were lost during wheat breeding. Furthermore, we identified 221 spatial pairs of NLR genes in the genome, which show co-evolutionary patterns similar to those of physical NLR pairs. Finally, we identified 1710 candidate NLR genes potentially involved in resistance to various diseases or environmental adaptation. Overall, our study establishes a comprehensive and diversified NLR gene resource that will facilitate the discovery and utilization of genes for disease resistance and climate adaptation in wheat.

分类号:

  • 相关文献

[1]充分发掘保护利用生物多样性;促进农业可持续发展——《生物多样性与小麦改良》简评. 李祥洲. 1997

[2]The pan-NLRome analysis based on 23 genomes reveals the diversity of NLRs in Brassica napus. Ning, Weidong,Wang, Wenzheng,Liu, Zijian,Xie, Weibo,Chen, Hanchen,Hong, Dengfeng,Yang, Qing-Yong,Cheng, Shifeng,Guo, Liang. 2025

[3]Genetic basis of geographical differentiation and breeding selection for wheat plant architecture traits. Yangyang Liu,Kuocheng Shen,Changbin Yin,Xiaowan Xu,Xuchang Yu,Botao Ye,Zhiwen Sun,Jiayu Dong,Aoyue Bi,Xuebo Zhao,Daxing Xu,Zhonghu He,Xueyong Zhang,Chenyang Hao,Jianhui Wu,Ziying Wang,He Wu,Danni Liu,Lili Zhang,Liping Shen,Yuanfeng Hao,Fei Lu,Zifeng Guo. 2023

[4]Wheat breeding history reveals synergistic selection of pleiotropic genomic sites for plant architecture and grain yield. Aili Li,Chenyang Hao,Zhenyu Wang,Shuaifeng Geng,Meiling Jia,Fang Wang,Xiang Han,Xingchen Kong,Lingjie Yin,Shu Tao,Zhongyin Deng,Ruyi Liao,Guoliang Sun,Ke Wang,Xingguo Ye,Chengzhi Jiao,Hongfeng Lu,Yun Zhou,Dengcai Liu,Xiangdong Fu,Xueyong Zhang,Long Mao. 2022

[5]Fast integration and accumulation of beneficial breeding alleles through an AB-NAMIC strategy in wheat. Jiao, Chengzhi,Hao, Chenyang,Li, Tian,Bohra, Abhishek,Wang, Lanfen,Hou, Jian,Liu, Hongxia,Liu, Hong,Zhao, Jing,Wang, Yamei,Liu, Yunchuan,Wang, Zhiwei,Jing, Xin,Wang, Xiue,Varshney, Rajeev K.,Fu, Junjie,Zhang, Xueyong. 2023

[6]Genome-Wide Association Study Uncover the Genetic Architecture of Salt Tolerance-Related Traits in Common Wheat (Triticum aestivum L.). Xiaoyan Quan,Jindong Liu,Ning Zhang,Chunjuan Xie,Hongmei Li,Xianchun Xia,Wenxing He,Yuxiang Qin. 2021

[7]Genome-Wide Association Study Uncover the Genetic Architecture of Salt Tolerance-Related Traits in Common Wheat (Triticum aestivum L.). Xiaoyan Quan,Jindong Liu,Ning Zhang,Chunjuan Xie,Hongmei Li,Xianchun Xia,Wenxing He,Yuxiang Qin. 2021

[8]Identification of Genetic Loci on Chromosome 4B for Improving the Grain Number per Spike in Pre-Breeding Lines of Wheat. Jinpeng Zhang,Qifu Yao,Ruixin Li,Yuqing Lu,Shenghui Zhou,Haiming Han,Weihua Liu,Xiuquan Li,Xinming Yang,Lihui Li. 2022

[9]A high-resolution genotype–phenotype map identifies the TaSPL17 controlling grain number and size in wheat. Yangyang Liu,Jun Chen,Changbin Yin,Ziying Wang,He Wu,Kuocheng Shen,Zhiliang Zhang,Lipeng Kang,Song Xu,Aoyue Bi,Xuebo Zhao,Daxing Xu,Zhonghu He,Xueyong Zhang,Chenyang Hao,Jianhui Wu,Yan Gong,Xuchang Yu,Zhiwen Sun,Botao Ye,Danni Liu,Lili Zhang,Liping Shen,Yuanfeng Hao,Youzhi Ma,Fei Lu,Zifeng Guo. 2023

[10]Genome-wide association study for phosphate responsive root hair length and density in bread wheat. Saman Maqbool,Fatima Saeed,Ammarah Maqbool,Muhammad Ibrar Khan,Mohsin Ali,Awais Rasheed,Xianchun Xia,Zhonghu He. 2023

[11]Genome wide association and haplotype analyses for the crease depth trait in bread wheat (Triticum aestivum L.). Chengxiang Song,Kaidi Xie,Xin Hu,Zhihua Zhou,Ankui Liu,Yuwei Zhang,Jiale Du,Jizeng Jia,Lifeng Gao,Hailiang Mao. 2023

[12]A genome-wide association study identifies novel QTL for wheat yield stability under drought stress. Xiaoqiang Liu,Zhaolin Yang,Wenjia Hu,Sitong Liu,Runze Sun,Songsong Jin,Khandmaa Nergui,Guangyao Zhao,Lifeng Gao,Yongxiu Liu,Xin Deng. 2024

[13]TabHLH27 orchestrates root growth and drought tolerance to enhance water use efficiency in wheat. Wang, Dongzhi,Zhang, Xiuxiu,Cao, Yuan,Batool, Aamana,Xu, Yongxin,Qiao, Yunzhou,Li, Yongpeng,Wang, Hao,Lin, Xuelei,Bie, Xiaomin,Zhang, Xiansheng,Jing, Ruilian,Dong, Baodi,Tong, Yiping,Teng, Wan,Liu, Xigang,Xiao, Jun. 2024

[14]A high-resolution genotype-phenotype map identifies the TaSPL17 controlling grain number and size in wheat. Liu, Yangyang,Chen, Jun,Yin, Changbin,Wang, Ziying,Wu, He,Shen, Kuocheng,Zhang, Zhiliang,Kang, Lipeng,Xu, Song,Bi, Aoyue,Zhao, Xuebo,Xu, Daxing,He, Zhonghu,Zhang, Xueyong,Hao, Chenyang,Wu, Jianhui,Gong, Yan,Yu, Xuchang,Sun, Zhiwen,Ye, Botao,Liu, Danni,Zhang, Lili,Shen, Liping,Hao, Yuanfeng,Ma, Youzhi,Lu, Fei,Guo, Zifeng. 2023

[15]Genome-wide association analysis of wheat stem traits using 55K microarrays. Wei Wang,Na Sun,Kai Zhao,Ji Kun Song,Hui Fang,Guiqiang Fan,Yonghong Gao,Tianrong Huang,Yindeng Ding. 2025

[16]Genome-Wide Identification of Wheat Gene Resources Conferring Resistance to Stripe Rust. Ma, Qiaoyun,Yan, Dong,Pang, Binshuang,Bai, Jianfang,Yang, Weibing,Gao, Jiangang,Chen, Xianchao,Hou, Qiling,Zhang, Honghong,Tian, Li,Li, Yahui,Jia, Jizeng,Zhang, Lei,Chen, Zhaobo,Gao, Lifeng,Liao, Xiangzheng. 2025

[17]30个小麦新品系抗条锈病基因分析及成株期抗病性评价. 冯晶,蔺瑞明,林凤,徐世昌. 2013

[18]小麦抗菌蛋白编码基因BS108的克隆及其转基因抗病小麦的创制. 李钊,周淼平,张增艳,庄洪涛,徐惠君,杜丽璞,叶兴国. 2010

[19]渗透调节物质及有机附加物对小麦体细胞胚发生影响的研究(英文). 孙朝霞,侯思宇,王玉国. 2008

[20]普通小麦品种辐射敏感性模糊聚类分析<英文>. 冯志杰,王琳清. 1992

作者其他论文 更多>>