数字农科院2.0

Identification of cotton PIP5K genes and role of GhPIP5K9a in primary root development

文献类型： 外文期刊

作者： Kaikai Qiao;Jiaoyan Lv;Juxin Hao;Chenglong Zhao;Shuli Fan;Qifeng Ma

作者机构：

关键词： Bioinformatic;Cotton;GhPIP5K9a;Phosphatidylinositol 4 phosphate 5-kinase (PIP5K);Primary root

期刊名称： Gene

ISSN： 0378-1119

年卷期： 2024 年 921 卷

页码：

收录情况： SCIE（2024版）

摘要： Phosphatidylinositol 4 phosphate 5-kinase (PIP5K) is crucial for the phosphatidylinositol (PI) signaling pathway. It plays a significant role in plant growth and development, as well as stress response. However, its effects on cotton are unknown. This study identified PIP5K genes from four cotton species and conducted bioinformatic analyses, with a particular emphasis on the functions of GhPIP5K9a in primary roots. The results showed that cotton PIP5Ks were classified into four subgroups. Analysis of gene structure and motif composition showed obvious conservation within each subgroup. Synteny analysis suggested that the PIP5K gene family experienced significant expansion due to both whole-genome duplication (WGD) and segmental duplication. Transcriptomic data analysis revealed that the majority of GhPIP5K genes had the either low or undetectable levels of expression. Moreover, GhPIP5K9a is highly expressed in the root and was located in plasmalemma. Suppression of GhPIP5K9a transcripts resulted in longer primary roots, longer primary root cells and increased auxin polar transport-related genes expression, and decreased abscisic acid (ABA) content, indicating that GhPIP5K9a negatively regulates cotton primary root growth. This study lays the foundation for further exploration of the role of the PIP5K genes in cotton.

分类号：

  • 相关文献

[1]Cloning and Expression of the Chloroplast Copper/Zinc-Superoxide Dismutase Gene in Upland Cotton （Gossypium hirsutum L.）. Yu Shuxun,Fan Shuli,Song Meizhen. 2007

[2]2015年全国棉花种植品种监测报告——播种品种(系)344个;数量减少83个;减幅19.4%. 毛树春,冯璐,芦建华. 2016

[3]2015年中国与美国棉花种植品种比较. 冯璐,毛树春. 2016

[4]兰州百合病毒病原的DAS-ELISA检测. 王发林,古勤生,刘芬,彭斌,刘丽锋. 2003

[5]Chicken Polymorphism at Pre-MicroRNAs Inferred from SNP Data. Zhang, Chuan-sheng,Geng, Li-ying,Zhang, Jin,Zhu, Wen-jin,Du, Li-xin. 2010

[6]From tradition to innovation: conventional and deep learning frameworks in genome annotation. Chen, Zhaojia,ul Ain, Noor,Zhao, Qian,Zhang, Xingtan. 2024

[7]Genome-wide identification and characterization of the KNOX gene family in Vitis amurensis. Linling Liu,Wenpeng Lu,Shutian Fan,Yiming Yang. 2025

[8]The auxin transporter, OsAUX1, is involved in primary root and root hair elongation and in Cd stress responses in rice (Oryzasativa L.). Yu, ChenLiang,Sun, ChenDong,Wang, Suikang,Liu, Fang,Liu, Yan,Chen, YunLong,Jiang, De An,Qi, YanHua,Shen, Chenjia,Li, Chuanyou,Qian, Qian,Aryal, Bibek,Geisler, Markus.

[9]Auxin and target of rapamycin spatiotemporally regulate root organogenesis. Xiulan Xie,Ying Wang,Raju Datla,Maozhi Ren. 2021

[10]Primary root and root hair development regulation by OsAUX4 and its participation in the phosphate starvation response. Rigui Ye,Yunrong Wu,Zhenyu Gao,Hao Chen,Lixia Jia,Dongming Li,Xugang Li,Qian Qian,Yanhua Qi. 2021

[11]C-terminally encoded peptide-like genes are associated with the development of primary root at qRL16.1 in soybean. Kumawat, Giriraj,Cao, Dong,Park, Cheolwoo,Xu, Donghe. 2024

[12]Sucrose mediates moderate salinity-promoted primary root growth in rapeseed. Shi Hang Fan,Zi Hong Huang,Hong Fang Liu,Xin Fang Zhang,Wei Hua,Zheng Wei Fu. 2025

[13]Histological and Ultrastructural Observation Reveals Significant Cellular Differences between Agrobacterium Transformed Embryogenic and Non-embryogenic Calli of Cotton. Shang, Hai-Hong,Liu, Chuan-Liang,Zhang, Chao-Jun,Li, Feng-Lian,Hong, Wei-Dong,Li, Fu-Guang.

[14]Genome-Scale Analysis Of The Wri-Like F.amily In Gossypium And F unctional Characterization Of Ghwri1A Controlling Triacylglycerol Content. Wang, Nuohan,Ma, Jianjiang,Liu, Guoyuan,Yu, Jiwen,Geng, Yanhui,Wu, Man,Li, Dan,Zhang, Jinfa,Zang, Xinshan,Pei, Wenfeng,Cui, Yupeng,Li, Xingli. 2018

[15]Genome-Wide Identification And Expression Analysis O.f The Metacaspase Gene F amily In Gossypium Species. Liu, Aiying,Zhang, Zhen,Jiang, Xiao,Zhang, Zhibin,Fan, Senmiao,Deng, Xiaoying,Ge, Qun,Lei, Kang,Gong, Juwu,Li, Junwen,Shi, Yuzhen,Yuan, Youlu,Huang, Jinyong,Gong, Wankui,Zou, Xianyan,Jia, Tingting,Zhang, Lipeng,Yuan, Youlu,Shang, Haihong,Fan, Liqiang,Zhang, Shuya,Shang, Haihong. 2019

[16]Gbs Mapping And Analysis Of G.enes Conserved Between Gossypium T omentosum And Gossypium Hirsutum Cotton Cultivars That Respond To Drought Stress At The Seedling Stage Of The Bc2F2 Generation. Hou, Yuqing,Magwanga, Richard Odongo,Lu, Pu,Kirungu, Joy Nyangasi,Magwanga, Richard Odongo,Xu, Yanchao,Hu, Yangguang,Zhou, Zhongli,Diouf, Latyr,Liu, Fang,Dong, Qi,Wang, Xingxing,Cai, Xiaoyan,Wang, Kunbo. 2018

[17]Molecular Characterisation And Functional Analysis O.f A Cytochrome P450 G ene In Cotton. Sun, Quan,Wang, Weina,Shi, Yuzhen,Sun, Quan,Wang, Weina,Zhang, Xiao,Zhou, Kexue,Yuan, Youlu,Zhang, Xiangrui,Mo, Jianchuan,Cheng, Jieru,Chu, Zongyan,Cai, Chaowei,Cai, Yingfan,Du, Xiongming,Long, Lu,Miao, Chen,Gao, Wei,Liu, Yujia. 2017

[18]Molecular Evolution And Stress And P.hytohormone Responsiveness Of Sut G enes In Gossypium Hirsutum. Liu, Yangai,Ma, Xiongfeng,Pei, Xiaoyu,Wang, Zhenyu,Song, Chengxiang,Sun, Kuan,Yang, Daigang,Zhou, Xiaojian,Zhang, Fei,Ren, Zhongying,He, Kunlun,Li, Wei. 2018

[19]Topical Shading Substantially Inhibits Vegetative B.ranching By Altering Leaf P hotosynthesis And Hormone Contents Of Cotton Plants. Li, Cundong,Dong, Hezhong,Kong, Xiangqiang,Kong, Xiangqiang,Dai, Jianlong,Dong, Hezhong,Dong, Hezhong,Li, Ting,Zhang, Yanjun,Li, Ting. 2019

[20]Rna-Sequencing, Physiological And Rnai Analyses P.rovide Insights Into The R esponse Mechanism Of The Abc-Mediated Resistance To Verticillium Dahliae Infection In Cotton. Peng, Renhai,Magwanga, Richard Odongo,Lu, Pu,Wang, Kunbo,Wang, Xingfen,Zhou, Zhongli,Xu, Yanchao,Wang, Xingxing,Cai, Xiaoyan,Dong, Qi,Dong, Qi,Hou, Yuqing,Magwanga, Richard Odongo,Liu, Fang,Kirungu, Joy Nyangasi,Ma, Zhiying. 2019

作者其他论文 更多>>