数字农科院2.0

Multifactorial and multiplexed epigenomic profiling of five DNA modifications in plants with mDIP-seq

文献类型: 外文期刊

作者: Jianli Yan; Jiaojiao Ji; Changbin Sun; Wei Xu

关键词: N/A

期刊名称: Science China-Life Sciences

ISSN: 1674-7305

年卷期: 2025 年

页码:

收录情况: SCIE(2025版) ; ; CSCD(2025-2026年度) ; ; 科技核心(2024版)

摘要: Several next-generation genomic sequencing (NGS) methods have been developed for mapping DNA modifications, such as BS-seq for 5mC. However, these methods are typically designed to detect a single modification in a single sample per experiment, which significantly limits their utility in constructing comprehensive multiplex and multifactorial modification atlases, and has led to a relative paucity of research on non-5mC modifications in plants. In this study, we developed mDIP-seq (multiplex DNA immunoprecipitation followed by sequencing), a novel DNA modification profiling technique that facilitates high-throughput and cost-effective mapping of multiple DNA modifications. mDIP-seq integrated DNA immunoprecipitation method with the single-stranded DNA (ssDNA) barcoding technique that we previously developed, which enabled strand-specific mapping of DNA modifications.

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