数字农科院2.0

A transposon insertion in the 5′ UTR of OsPT1 reprograms its expression pattern and promotes cadmium accumulation in rice grains

文献类型: 外文期刊

作者: Peng, Shasha;Wang, Dan;Liu, Jinling;Jiang, Su;Xu, Yuchen;Deng, Yufei;Zhou, Xiaolong;Hu, Fangzhi;Liu, Zhuo;Peng, Ye;Ao, Hejun;Xiao, Yinghui;Wang, Jiurong;Zhao, Junliang;Liu, Bin;Yi, Keke;Bai, Lianyang;Wang, Guo-Liang;Kang, Houxiang

作者机构:

关键词: rice;cadmium accumulation;loci associated with grain cadmium content;transporter;GWAS;minia-ture inverted-repeat transposable element

期刊名称: PLANT COMMUNICATIONS

ISSN: 2590-3462

年卷期: 2025 年 7 卷 1 期

页码:

收录情况: SCIE(2025版) ; ; CSCD(2025-2026年度)

摘要: Cadmium (Cd) accumulation in rice grains presents a serious risk to human health; however, the mechanisms underlying this process remain incompletely understood. In this study, a genome-wide association analysis identified 29 loci associated with grain Cd content (LAGCCs). Among these, one of the most strongly associated loci, LAGCC4, contains the transporter gene OsPT1, whose haplotypes show a strong correlation with Cd content in rice grains. A transposon, H-MITE, inserts into the 5 ' untranslated region (UTR) of OsPT1, altering its expression pattern and leading to increased Cd accumulation. Furthermore, we identified the transcription factor OsbHLH35, which specifically binds to the OsPT1H-MITE promoter to regulate its transcription in response to Cd stress. Targeted knockout of either OsPT1H-MITE or OsbHLH35 via CRISPR-Cas9 gene editing significantly reduced grain Cd content, with reductions ranging from 61.7% to 80.6%. This study reveals a previously unrecognized mechanism contributing to high Cd accumulation in rice and identifies genetic targets for breeding rice varieties with reduced Cd content.

分类号:

  • 相关文献

[1]Cadmium-absorptive Bacillus vietnamensis 151–6 reduces the grain cadmium accumulation in rice (Oryza sativa L.): Potential for cadmium bioremediation. Xiaoxia Yu,Jin Tong Zhao,Zundan Ding,Feng Xiong,Xiaoqing Liu,Jian Tian,Ningfeng Wu. 2023

[2]水稻淡褐斑叶突变体lbsll的遗传分析与基因定位. 奉保华,杨杨,施勇烽,林璐,陈洁,黄奇娜,魏彦林,HeiLEUNG,吴建利. 2012

[3]OsBTF3转基因水稻对病原茵侵染的反应和防卫基因的表达分析. 陈华民,吴茂森,何晨阳. 2012

[4]The Power of Inbreeding: NGS-Based GWAS of Rice Reveals Convergent Evolution during Rice Domestication. Wang, Hongru,Xiao, Yunhua,Chu, Chengcai,Wang, Hongru,Xiao, Yunhua,Chu, Chengcai,Wang, Hongru,Xiao, Yunhua,Wang, Jun,Xu, Xun,Vieira, Filipe Garrett,Li, Zhikang,Nielsen, Rasmus. 2016

[5]A Genome-Wide Association Study of Field Resistance to Magnaporthe Oryzae in Rice. Kang, Houxiang,Li, Zhiqiang,Liu, Minghao,Zhu, Xiaoli,Liu, Wende,Wang, Guo-Liang,Zhu, Dan,Liu, Minghao,Wang, Yue,Wang, Dan,Wang, Zhilong,Wang, Guo-Liang,Zhu, Dan,Liu, Minghao,Wang, Yue,Wang, Dan,Wang, Zhilong,Wang, Guo-Liang,Wang, Guo-Liang. 2016

[6]Loci and Natural Alleles for Low-Nitrogen-Induced Growth Response Revealed by the Genome-Wide Association Study Analysis in Rice (Oryza sativa L.). Yang Lv,Jie Ma,Yueying Wang,Quan Wang,Xueli Lu,Haitao Hu,Qian Qian,Longbiao Guo,Lianguang Shang. 2021

[7]Rapid Identification of QTL for Mesocotyl Length in Rice Through Combining QTL-seq and Genome-Wide Association Analysis. Yamei Wang,Jindong Liu,Yun Meng,Hongyan Liu,Chang Liu,Guoyou Ye. 2021

[8]Genome-Wide Association Study Reveals Novel QTLs and Candidate Genes for Grain Number in Rice. Peiyuan Li,Qing Li,Xueli Lu,Liping Dai,Long Yang,Yifeng Hong,Tiancai Yan,Lan Shen,Qiang Zhang,Deyong Ren,Li Zhu,Jiang Hu,Guojun Dong,Guangheng Zhang,Qian Qian,Dali Zeng. 2022

[9]Genome-Wide Association Analysis Reveals the Gene Loci of Yield Traits under Drought Stress at the Rice Reproductive Stage. Nansheng Wang,Zhiyuan Gao,Wanyang Zhang,Yingzhi Qian,Di Bai,Xueyu Zhao,Yaling Bao,Zhenzhen Zheng,Xingmeng Wang,Jianfeng Li,Wensheng Wang,Yingyao Shi. 2023

[10]Integrating GWAS and transcriptomics to identify candidate genes conferring heat tolerance in rice. Pingping Li ,Jing Jiang,Guogen Zhang,Siyu Miao,Jingbing Lu,Yukang Qian,Xiuqin Zhao,Wensheng Wang,Xianjin Qiu,Fan Zhang,and Jianlong Xu. 2023

[11]Genetic diversity analysis and GWAS reveal the adaptive loci of milling and appearance quality of japonica rice (Oryza sativa L.) in Northeast China. Xin XU,Jun hua YE,Ying ying YANG,Ruo si LI,Zhen LI,Shan WANG,Yan fei SUN,Meng chen ZHANG,Qun XU,Yue FENG,Xing hua WEI,Yao long YANG. 2022

[12]Genome-Wide Association Study of the Genetic Basis of Effective Tiller Number in Rice. Mengmeng Ren,Minghan Huang,Haiyang Qiu,Yan Chun,Lu Li,Ashmit Kumar,Jingjing Fang,Jinfeng Zhao,Hang He,Xueyong Li. 2021

[13]Genetic Bases of Flow-and Sink-Related Traits in Rice Revealed by Genome-Wide Association Study. Laiyuan Zhai,Yun Wang,An Yan,Liqiang Chen,Kuitian Shao,Wenzhong Zhang,Jianlong Xu. 2022

[14]Genome-Wide Association Study of Rice Grain Shape and Chalkiness in a Worldwide Collection of Xian Accessions. Nansheng Wang,Huguang Chen,Yingzhi Qian,Zhaojie Liang,Guiqiang Zheng,Jun Xiang,Ting Feng,Min Li,Wei Zeng,Yaling Bao,Erbao Liu,Chaopu Zhang,Jianlong Xu,Yingyao Shi. 2023

[15]Genome-Wide Association Study of Xian Rice Grain Shape and Weight in Different Environments. Nansheng Wang,Wanyang Zhang,Xinchen Wang,Zhenzhen Zheng,Di Bai,Keyang Li,Xueyu Zhao,Jun Xiang,Zhaojie Liang,Yingzhi Qian,Wensheng Wang,Yingyao Shi. 2023

[16]Genome-wide association studies identified OsTMF as a gene regulating rice seed germination under salt stress. Lifeng Liu,Yanling Ma,Heng Zhao,Lin Guo,Yan Guo,Chun Ming Liu. 2024

[17]Candidate Genes and Favorable Haplotypes Associated with Iron Toxicity Tolerance in Rice. Siyu Miao,Jingbing Lu,Guogen Zhang,Jing Jiang,Pingping Li,Yukang Qian,Wensheng Wang,Jianlong Xu,Fan Zhang,Xiuqin Zhao. 2024

[18]GWAS unravels acid phosphatase ACP2 as a photosynthesis regulator under phosphate starvation conditions through modulating serine metabolism in rice. Liu, Sushuang,Xu, Zhan,Essemine, Jemaa,Liu, Yanmin,Liu, Chundong,Zhang, Feixue,Iqbal, Zubair,Qu, Mingnan. 2024

[19]Genome-wide association study and genomic prediction for resistance to brown planthopper in rice. Cong Zhou,Weihua Jiang,Jianping Guo,Lili Zhu,Lijiang Liu,Shengyi Liu,Rongzhi Chen,Bo Du,Jin Huang. 2024

[20]Uncovering key salt-tolerant regulators through a combined eQTL and GWAS analysis using the super pan-genome in rice. Hua Wei,Xianmeng Wang,Zhipeng Zhang,Longbo Yang,Qianqian Zhang,Yilin Li,Huiying He,Dandan Chen,Bin Zhang,Chongke Zheng,Yue Leng,Xinglan Cao,Yan Cui,Chuanlin Shi,Yifan Liu,Yang Lv,Jie Ma,Wenchuang He,Xiangpei Liu,Qiang Xu,Qiaoling Yuan,Xiaoman Yu,Tianyi Wang,Hongge Qian,Xiaoxia Li,Bintao Zhang,Hong Zhang,Wu Chen,Mingliang Guo,Xiaofan Dai,Yuexing Wang,Xiaoming Zheng,Longbiao Guo,Xianzhi Xie,Qian Qian,Lianguang Shang. 2024

作者其他论文 更多>>