数字农科院2.0

Genome-wide analysis of Keratinibaculum paraultunense strain KD-1( T) and its key genes and metabolic pathways involved in the anaerobic degradation of feather keratin

文献类型： 外文期刊

作者： Wu, Weidong;Ma, Shichun;Chen, Rui;Huang, Yan;Deng, Yu

作者机构：

关键词： Keratinibaculum paraultunense strain KD-1( T);Genome analysis;Keratin degradation;Amino acid metabolism;Carbohydrate metabolism

期刊名称： ARCHIVES OF MICROBIOLOGY

ISSN： 0302-8933

年卷期： 2022 年 204 卷 10 期

页码：

收录情况： SCIE（2022版）

摘要： Keratinibaculum paraultunense strain KD-1( T) (= JCM 18769( T) = DSM 26752( T)) is a strictly anaerobic rod-shaped bacterium. Under optimal conditions, feather keratin can be completely degraded by strain KD-1 within 24 h. Genomic sequencing showed that the genome was a single circular chromosome consisting of 2,307,997 base pairs (bp), with an average G + C content of 29.8% and no plasmids. A total of 2308 genes were annotated, accounting for 88.87% of the genomic sequence, and 1495 genes were functionally annotated. Among these, genes Kpa0144, Kpa0540, and Kpa0541 encoding the thioredoxin family members were identified, and may encode the potential disulfide reductases, with redox activity for protein disulfide bonds. Two potential keratinase-encoding genes, Kpa1675 and Kpa2139, were also identified, and corresponded to the ability of strain KD-1 to hydrolyze keratin. Strain KD-1 encoded genes involved in the heterotrophic metabolic pathways of 14 amino acids and various carbohydrates. The metabolic pathways for amino acid and carbohydrate metabolism were mapped in strain KD-1 based on KEGG annotations. The complete genome of strain KD-1 provided fundamental data for the further investigation of its physiology and genetics.

分类号：

  • 相关文献

[1]Metabolomics combined with physiology and transcriptomics reveal how Nicotiana tabacum leaves respond to cold stress. Xiliang Song,Hui Wang,Yujie Wang,Qiangcheng Zeng,Xuebo Zheng. 2024

[2]Genomic in situ hybridization (GISH) discriminates between the A and the B genomes in diploid and tetraploid Setaria species. Benabdelmouna, A,Shi, Y,Abirached-Darmency, M,Darmency, H. 2001

[3]A novel genome of C and the first autotetraploid species in the Setaria genus identified by genomic in situ hybridization. Wang, Yongqiang,Zhi, Hui,Li, Wei,Li, Haiquan,Wang, Yongfang,Diao, Xianmin,Wang, Yongfang,Huang, Zhanjing,Diao, Xianmin,Zhi, Hui,Diao, Xianmin.

[4]Draft genome sequence analysis of a novel MLST (ST5028) and multidrug-resistant Klebsiella quasipneumoniae subsp. similipneumoniae (Kp4) strain 456S1 isolated from a pig farm in China. Yanan Zhao,Lingli Liu,Shaohui Wang,Mingxing Tian,Jingjing Qi,Tao Li,Shengqing Yu. 2021

[5]Genome-Wide Analysis Of Mycoplasma Dispar P.rovides Insights Into Putative V irulence Factors And Phylogenetic Relationships. Chen, SL,Hao, HF,Yan, XM,Liu, YS,Chu, YF. 2019

[6]Genome-Wide Analysis Of Mycoplasma Dispar Provides Insights Into Putative Virulence Factors And Phylogenetic Relationships. . 2019

[7]Isolation and characterization of a novel parvovirus from a red-crowned crane, China, 2021. Hao Liu,Jie Huang,Zi Shuo Lu,Li Xia Li,Xiao Tong Liang,Tian Tang,Wen Chao Sun,Hui Jun Lu,Ning Yi Jin,Xue Bai,Xing Kui Si. 2023

[8]Isolation, characterization, and application of the novel polyvalent bacteriophage vB_EcoM_XAM237 against pathogenic Escherichia coli. Chai, Jiyun,Sun, Hongfei,Schwarz, Stefan,Huang, Yuxuan,Xie, Shuangyu,Xu, Qiu,Lin, Longhua,Ma, Caiping,Hou, Jie,Zhu, Yao,Zhang, Wanjiang. 2025

[9]Role of long noncoding rnas zlmstrg.11348 and uemstrg.02678 in temperature-dependent culm swelling in zizania latifolia. Zheng-Hong Wang,Ning Yan,Xi Luo,Sai-Sai Guo,Shu-Qin Xue,Jiang-Qiong Liu,Shen-Shen Zhang,Li-Wen Zheng,Jing-Ze Zhang,De-Ping Guo. 2021

[10]Fungicide-loaded mesoporous silica nanoparticles promote rice seedling growth by regulating amino acid metabolic pathways. Pengyue Zhao,Chaojie Wang,Shuojia Zhang,Li Zheng,Fengmin Li,Chong Cao,Lidong Cao,Qiliang Huang. 2022

[11]Effects of the SLC38A2–mTOR Pathway Involved in Regulating the Different Compositions of Dietary Essential Amino Acids–Lysine and Methionine on Growth and Muscle Quality in Rabbits. Bin Zhang,Boyuan Ning,Xiaoyang Chen,Chenyang Li,Mengqi Liu,Zhengkai Yue,Lei Liu,Fuchang Li. 2022

[12]Mechanism of [CO2] Enrichment Alleviated Drought Stress in the Roots of Cucumber Seedlings Revealed via Proteomic and Biochemical Analysis. Yiman Li,Wendong Zhang,Dalong Zhang,Yinjian Zheng,Yaliang Xu,Binbin Liu,Qingming Li. 2022

[13]Fungicide-loaded mesoporous silica nanoparticles promote rice seedling growth by regulating amino acid metabolic pathways . Pengyue Zhao,Chaojie Wang,Shuojia Zhang,Li Zheng,Fengmin Li,Chong Cao,Lidong Cao,Qiliang Huang. 2021

[14]Systemic Evaluation of the Effect of Diabetes Mellitus on Breast Cancer in a Mouse Model. Wei, Nana,Lu, Jinmiao,Lin, Zhibing,Wang, Xiaoyu,Cai, Mengmeng,Jiang, Shengyao,Chen, Xiaoyu,Zhu, Shilan,Zhang, Dong,Cui, Li. 2022

[15]A key mutation in magnesium chelatase I subunit leads to a chlorophyll-deficient mutant of tea (Camellia sinensis). Zhang, Chenyu,Liu, Haoran,Wang, Junya,Li, Yuanyuan,Liu, Dingding,Ye, Yuanyuan,Huang, Rong,Li, Sujuan,Chen, Liang,Chen, Jiedan,Yao, Mingzhe,Ma, Chunlei. 2023

[16]Baicalin Protects Broilers against Avian Coronavirus Infection via Regulating Respiratory Tract Microbiota and Amino Acid Metabolism. Feng H.,Zhang J.,Wang X.,Guo Z.,Wang L.,Zhang K.,Li J.. 2024

[17]Probiotic Potentials and Protective Effects of Ligilactobacillus animalis LA-1 Against High-Fat Diet-Induced Obesity in Mice. Qingya Wang,Yuyin Huang,Kun Meng,Haiou Zhang,Yunsheng Han,Rui Zhang,Xiling Han,Guohua Liu,Hongying Cai,Peilong Yang. 2025

[18]Whole Genome Sequencing and Extracellular Metabolite Profiling of Lactiplantibacillus plantarum FRT4: Insights into Probiotic Functionality. Yuyin Huang,Kun Meng,Guohua Liu,Zhimin Chen,Yunsheng Han,Peilong Yang,Rui Zhang,Hongying Cai. 2025

[19]Rutin treatment delays postharvest chilling injury in green pepper fruit by modulating antioxidant defense capacity. Yuqi Bin,Xianxin Wu,Junyan Shi,Yaqi Zhao,Xiaozhen Yue,Xiaodi Xu,Jinhua Zuo,Shuzhi Yuan,Qing Wang. 2025

[20]Amino Acid Metabolism and Transporters in Plant-Pathogen Interactions: Mechanisms and Implications. Yao, Xuehui,Sui, Xiaolei,Zhang, Yangyong. 2025

作者其他论文 更多>>