数字农科院2.0

Analysis of the chitin synthase gene family in Ganoderma lucidum: its structure, phylogeny, and expression patterns

文献类型： 外文期刊

作者： Liu, Linling;Yang, Yiming;Li, Jintao;Gao, Yanliang;Yan, Meixia

作者机构：

关键词： Chitin synthase gene family;Ganoderma lucidum;Genome-wide identification;Bioinformatics;Expression analysis

期刊名称： PEERJ

ISSN： 2167-8359

年卷期： 2025 年 13 卷

页码：

收录情况： SCIE（2025版）

摘要： Background. Chitin synthases are essential enzymes in fungi, contributing to various biological processes such as hyphal growth, sporulation, and cell wall stability. Despite their well-documented functions in other fungal species, the specific roles of chitin synthases in Ganoderma lucidum remain unexplored. This investigation systematically characterized the complete chitin synthase gene family in Ganoderma lucidum. Methods. A comprehensive analysis was conducted using bioinformatics tools to examine genomic localization, gene structure, conserved domains, and phylogenetic evolution. By employing bioinformatic approaches, the study investigated promoter cis-elements and expression patterns to elucidate the regulatory mechanisms of these genes in G. lucidum. Results. In G. lucidum, eight chitin synthase (GlCS) family members were identified and phylogenetically classified into five distinct classes. Our investigation revealed stage-specific expression patterns of GlCS genes throughout the fungal development process. GlCS1, GlCS2, GlCS5, GlCS6, and GlCS8 exhibited significantly greater expression levels in the early fruiting body (EA) stage than in the other developmental phases. In the mature fruiting body (MA) stage, GlCS3 was predominantly expressed. In the primordium formation (PR) stage, GlCS7 exhibited peak expression levels. Six genes (GlCS1, GlCS3, GlCS4, GlCS6, GlCS7, and GlCS8) were markedly upregulated under 40 degrees C thermal stress, suggesting their potential roles in thermotolerance mechanisms. These findings demonstrate functional diversification among GlCS family members across different developmental stages and stress conditions.

分类号：

  • 相关文献

[1]Genome-wide identification and gene expression analysis of the 14–3-3 gene family in potato (Solanum tuberosum L.). Feiyan He,Shaoguang Duan,Yinqiao Jian,Jianfei Xu,Jun Hu,Zhicheng Zhang,Tuanrong Lin,Feng Cheng,Guangcun Li. 2022

[2]Bioinformatic identification and expression analysis of the Malus domestica DREB2 transcription factors in different tissues and abiotic stress. Li, Huifeng,Sun, Xiaoli,Jia, Houzhen,Ran, Kun,Zhao, Qiang.

[3]Genome-wide identification, characterization, and expression analysis of keratin genes (KRTs) family in yak (Bos grunniens). Qi Bao,Xiaolan Zhang,Pengjia Bao,Chunnian Liang,Xian Guo,Mancai Yin,Min Chu,Ping Yan. 2022

[4]ComparativecharacterizationofmicroRNAprofilesofdifferentgenotypesofToxoplasmagondii. 周东辉,MinjunXu,SiyangHuang,FurongZhao,AlasdairJ.Nisbet,HuiqunSong,XingquanZhu. 2013

[5]“大通”牦牛Lfcin基因克隆及生物信息学分析(英文). 裴杰,阎萍,姬国红,冯瑞林,梁春年,郭宪,曾玉峰,包鹏甲,褚敏. 2009

[6]Preparation Of Ganoderma Lucidum Polysaccharide Chromium (Iii) Complex And Its Hypoglycemic And Hypolipidemic Activities In High-Fat And High-Fructose Diet-Induced Pre-Diabetic Mice. Cao, Ying-Jia,Lin, Yi-Chen,Xu, Jia-Xin,Li, Lu,Bai, Wei-Dong,Lv, Xu-Cong,Xu, Jia-Xin,Li, Lu,Ni, Li,Zhang, Yan-Yan,Zhang, Yan-Yan,Guo, Wei-Ling,Liu, Jing-Yi,Liu, Bin,Lv, Xu-Cong,Lv, Xu-Cong,Lv, Xu-Cong,Rao, Ping-Fan,Cao, Ying-Jia,Liu, Bin,Guo, Wei-Ling,Lv, Xu-Cong,Lin, Yi-Chen. 2019

[7]Application of Herbal Plants in Organic Poultry Nutrition and Production. Shahrajabian M.H., Cheng Q., Sun W.. 2022

[8]Comparative Study on Bioactivities from Lingzhi or Reishi Medicinal Mushroom, Ganoderma lucidum (Agaricomycetes), Gives an Insight into the Fermentation Broth Showing Greater Antioxidative Activities. Wang, Xianchun,Peng, Yuande,Hu, Zhenxiu,Yang, Qi,Gong, Wenbing,Zhang, Zhoumei,Yan, Li,Tang, Pingping,Xie, Chunliang,Yan, Shaowei,Zhou, Yingjun,Zhu, Zuohua,Tang, Pingping. 2020

[9]Solid-state fermentation with Ganoderma lucidum improves nutritional quality and processing characteristics of wheat (Triticum aestivum L.). Mengting Weng,Jinxiao Cheng,Tongtong Lei,Pufu Lai,Hongyu Wang,Xuanming Tang,Di Zhang,Yanfang Pan. 2025

[10]Genome-wide analysis of the Hsf family in soybean and functional identification of GmHsf-34 involvement in drought and heat stresses. Li, Pan-Song,Chai, Shou-Cheng,Li, Pan-Song,Yu, Tai-Fei,He, Guan-Hua,Chen, Ming,Zhou, Yong-Bin,Xu, Zhao-Shi,Ma, You-Zhi. 2014

[11]Genome-Wide Analysis of the C3H Zinc Finger Transcription Factor Family and Drought Responses of Members in Aegilops tauschii. Jiang, An-Long,Xu, Zhao-Shi,Zhao, Guang-Yao,Cui, Xiao-Yu,Chen, Ming,Li, Lian-Cheng,Ma, You-Zhi.

[12]Investigation of the ASR family in foxtail millet and the role of ASR1 in drought/oxidative stress tolerance. Feng, Zhi-Juan,Xu, Zhao-Shi,Li, Lian-Cheng,Chen, Ming,Ma, You-Zhi,Feng, Zhi-Juan,Sun, Jiutong,Yang, Guang-Xiao,He, Guang-Yuan.

[13]Genome-wide identification and expression analysis of NIN-like Protein (NLP) genes reveals their potential roles in the response to nitrate signaling in watermelon. Gaopeng Yuan,Dexi Sun,Yifan Wang,Guolin An,Weihua Li,Wenjing Si,Junpu Liu,Yingchun Zhu. 2022

[14]Genome-Wide Identification and Preliminary Functional Analysis of BAM (β-Amylase) Gene Family in Upland Cotton. Yanlong Yang,Fenglei Sun,Penglong Wang,Mayila Yusuyin,Wumaierjiang Kuerban,Chengxia Lai,Chunping Li,Jun Ma,Fei Xiao. 2023

[15]Genome-wide identification and expression analysis of CRK gene family in chili pepper (Capsicum annuum L.) in response to Colletotrichum truncatum infection. Rout, Swati Sumit,Rout, Priyadarshini,Uzair, Muhammad,Kumar, Gagan,Nanda, Satyabrata. 2022

[16]Genome-wide identification of the gata transcription factor family in dichanthelium oligosanthes. Satyabrata Nanda,Gagan Kumar,Sudheer Kumar Yadav,Sajid Hussain. 2021

[17]Genome-wide identification, evolution and expression pattern analysis of the GATA gene family in Sorghum bicolor. Xin Yao,Dili Lai,Meiliang Zhou,Jingjun Ruan,Chao Ma,Weijiao Wu,Wenfeng Weng,Yu Fan,Jianping Cheng. 2023

[18]Genome-Wide Identification, Phylogenetic and Expression Analysis of Expansin Gene Family in Medicago sativa L.. Li, Yajing,Zhang, Yangyang,Cui, Jing,Wang, Xue,Li, Mingna,Zhang, Lili,Kang, Junmei. 2024

[19]Genome-Wide Characterization of the Maize (Zea mays L.) WRKY Transcription Factor Family and Their Responses to Ustilago maydis. Yang Wang,Wangshu Li,Jianzhou Qu,Fenghai Li,Wanli Du,Jianfeng Weng. 2023

[20]Genome-wide identification and functional analysis of the cellulose synthase-like gene superfamily in common oat (Avena sativa L.). Zhang S.,Hu H.,Cui S.,Yan L.,Wu B.,Wei S.. 2024

作者其他论文 更多>>