Genome-Wide Identification and Functional Prediction of LRR-RLK Family Genes in Foxtail Millet (Setaria italica) in Response to Stress
文献类型: 外文期刊
作者: Li, Zhijiang;Kang, Xinmiao;Song, Miaomiao;Dong, Xiaojie;Ma, Jinfeng;Yu, Jinhai;Li, Xiangyu;Zheng, Yalu;Sun, Guangquan;Diao, Xianmin;Liu, Xiaotong
作者机构:
关键词: LRR-RLK;foxtail millet;evolution analysis;stress response
期刊名称: INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
ISSN: 1661-6596
年卷期: 2025 年 26 卷 10 期
页码:
收录情况: SCIE(2025版)
摘要: Leucine-rich repeat receptor-like kinases (LRR-RLKs) are involved in the regulation of various biological processes, including plant growth, development, and responses to biotic and abiotic stresses. Foxtail millet (Setaria italica), an important cereal crop, has been extensively studied for its stress tolerance mechanisms. In this study, we performed a comprehensive phylogenetic analysis and chromosomal mapping of LRR-RLK genes in Setaria italica. A total of 285 SiLRR-RLK genes were identified and classified into 12 subfamilies based on phylogenetic relationships. Chromosome localization analysis revealed that SiLRR-RLK genes are unevenly distributed across the chromosomes, with certain regions showing gene clusters. Functional analysis of these genes under biotic and abiotic stress conditions suggested that several SiLRR-RLK family members are involved in key stress response pathways. Expression profiling indicated differential expression patterns of SiLRR-RLK genes in response to various stresses, including drought, salinity, and pathogen infection, highlighting their potential roles in stress adaptation. In conclusion, the phylogenetic and functional analysis of the SiLRR-RLK gene family in Setaria italica provides valuable insights into their roles in stress responses and lays the groundwork for future studies aimed at enhancing stress tolerance in foxtail millet.
分类号:
- 相关文献
作者其他论文 更多>>
-
Genome-wide identification of the RPD3/HDA1 gene family in foxtail millet (Setaria italica) and analysis of their association with plant height
作者:Liang, Hongkai;Zheng, Zhangfei;Yang, Puyuan;Cui, Xiaokuo;Wang, Liwei;Zhi, Hui;Jia, Guanqing;He, Qiang;Diao, Xianmin
关键词:Setaria italica;RPD3/HDA1;histone deacetylase;plant height;haplotype analysis;phytohormone response
-
An efficient target-mutant screening platform of model variety Ci846 facilitates genetic studies of Setaria
作者:Zhang, Hui;Liang, Hongkai;Zhi, Hui;Yuan, Di;Yao, Qi;Zhang, Renliang;Xing, Lihe;Yang, Baolan;Sang, Luman;Zhao, Lirong;Tang, Sha;Wang, Liwei;Wang, Hailong;Ren, Yushuang;Zhang, Hui;Zhang, Yanyan;Wang, Enbo;Man, Xinyu;Xu, Gongjin;Zhang, Linlin;He, Qiang;Diao, Xianmin;Jia, Guanqing
关键词:Setaria;foxtail millet;mutant library;phenotypic characterization;wholegenome resequencing
-
Molecular Observations on the Regulation of hIAPP Aggregation Process and Enhancement of Autophagy by the Short Peptide LPFYPN and Its Modified Peptides of Coix Seed Prolamins
作者:Zhang, Shu;Sun, Jingru;Yu, Shibo;Fu, Tianxin;Feng, Yuchao;Li, Zhijiang;Zhang, Dongjie;Wang, Changyuan
关键词:hIAPP;active peptides;autophagy;T2DM;INS-1 cell
-
Nitrogen and Gray Water Footprints of Various Cropping Systems in Irrigation Districts: A Case from Ningxia, China
作者:Liu, Huan;Liu, Xiaotong;Zhang, Tianpeng;Du, Xinzhong;Zhao, Ying;Luo, Jiafa;Qiu, Weiwen;Wu, Shuxia;Liu, Hongbin
关键词:irrigated areas;life cycle;nitrogen footprint;gray water footprint;LMDI;gray correlation analysis
-
A quantitative equation for umami evaluation of food and condiments based on the Weber-Fechner law
作者:Wang, Yijian;Wan, Shiwen;Pan, Sheng;Luan, Peng;Cen, Xiaoxu;Sun, Guangquan;Feng, Yaoze;Zhu, Ming
关键词:(1-1-4)Umami;Sensory evaluation;Sensory umami difference strength curve;Weber-Fechner Law
-
Cropformer: An interpretable deep learning framework for crop genomic prediction
作者:Wang, Hao;Yan, Shen;Wang, Wenxi;Chen, Yongming;Hong, Jingpeng;He, Qiang;Diao, Xianmin;Lin, Yunan;Chen, Yanqing;Cao, Yongsheng;Guo, Weilong;Fang, Wei
关键词:deep learning;genomic selection;multiple self-attention mechanisms;phenotypic prediction
-
De novo creation of narrowed plant architecture via CRISPR/Cas9-mediated mutagenesis of SiLGs in foxtail millet
作者:Zhang, Renliang;Guo, Ruifeng;Zhi, Hui;Tang, Sha;Wang, Liwei;Ren, Yuemei;Ren, Guangbing;Zhang, Shou;Feng, Jing;Diao, Xianmin;Jia, Guanqing
关键词:Foxtail millet;plant architecture;SiLG1;SiLG2