数字农科院2.0

The chromosome-level genome of the woolly apple aphid Eriosoma lanigerum provides insight into waxy synthesis and secretion

文献类型： 外文期刊

作者： Zhou, Hongxu;Zhang, Bin;Luo, Chaorui;Meng, Canyu;Teng, Ziwen;Guo, Yi;Li, Changyou;Xing, Longsheng;Li, Zaiyuan;Fan, Yinjun;Liu, Conghui;Qian, Wanqiang;Wan, Fanghao

作者机构：

关键词： （3-1-2）Fatty acid metabolism;ABC transporters;differential gene expression;chromosome-level assembly;transposable elements;evolutionary divergence;gene family expansion;wax secretion adaptation

期刊名称： ENTOMOLOGIA GENERALIS

ISSN： 0171-8177

年卷期： 2025 年

页码：

收录情况： SCIE（2025版）

摘要： Woolly apple aphid (WAA), Eriosoma lanigerum (Hausmann), is a worldwide invasive pest that seriously damages apple trees in almost all apple-growing areas. Waxy secretion is characterised as an important weapon in increasing invasion and adaptation to a broad range of biological and abiotic factors. We used PacBio reads to produce a 357 Mb highquality chromosome-level assembly for the WAA genome. The N50 lengths of contigs and chromosomes were 4.0 Mb and 65.1 Mb, respectively. In total, 95 Mb (12.5%) repeat sequences and 15,906 gene models were identified in the genome. We identified 101 expanded and 33 exclusive orthologous groups in E. lanigerum, mainly functioning in cell growth and death, signal transduction, and carbohydrate and amino acid metabolism, which contribute to adaptation and metabolite synthesis. To uncover the molecular basis of wax synthase processes, related enzymes and transporters were identified through transcriptomes of five developmental stages and among three segments. Although wax synthase-related genes were not found in WAA genome and other related species, four genes were identified involved in fatty acid biosynthesis and metabolism, thereby producing and transporting the waxy secretion of WAA. These results indicated that different pathways might be employed by WAA in wax ester biosynthesis compared with other eukaryotic organisms. These findings collectively provide novel insight into the molecular mechanisms of the wax synthase processes of WAA.

分类号：

  • 相关文献

[1]Genomic Analysis Based on Chromosome-Level Genome Assembly Reveals an Expansion of Terpene Biosynthesis of Azadirachta indica. Yuhui Du,Wei Song,Zhiqiu Yin,Shengbo Wu,Jiaheng Liu,Ning Wang,Hua Jin,Jianjun Qiao,Yi Xin Huo. 2022

[2]A chromosome-level reference genome of a Convolvulaceae species Ipomoea cairica. Jiang, Fan,Wang, Sen,Wang, Hengchao,Wang, Anqi,Xu, Dong,Liu, Hangwei,Yang, Boyuan,Yuan, Lihua,Lei, Lihong,Chen, Rong,Li, Weihua,Fan, Wei. 2022

[3]Comparative Genomics and Transcriptomics of the Extreme Halophyte Puccinellia tenuiflora Provides Insights Into Salinity Tolerance Differentiation Between Halophytes and Glycophytes. Guo Rui,Zhao Long,Zhang Kaijian,Lu Huiying,Bhanbhro Nadeem,Yang Chunwu. 2021

[4]Improved chromosome-level genome and annotation data for a leafy vegetable water spinach (Ipomoea aquatica). Fan Jiang,Sen Wang,Hengchao Wang,Dong Xu,Anqi Wang,Lihua Yuan,Wei Fan. 2023

[5]Genome sequencing and transcriptome analysis provide an insight into the hypoxia resistance of Channa asiatica. Chaowei Zhou,Junting Li,Yuting Duan,Suxing Fu,Hejiao Li,Yinhua Zhou,He Gao,Xinghua Zhou,Haiping Liu,Luo Lei,Jie Chen,Dengyue Yuan. 2024

[6]Relationship Between Gene Differential Expression of Leaves in Full Opening Flower Stages of Hybrids & Their Parents and Heterosis in Pest-resistant Cotton. XING Chao-Zhu,ZHAO Yun-Lei,YU Shu-Xun,ZHANG Xian-Long,GUO Li-Ping,WANG Hai-Lin. 2006

[7]Comparison of gene expression patterns between porcine cumulus-oocyte complexes and naked oocytes. Zhu, G. Y.,Feng, S. T.,Li, J. T.,Mu, Y. L.,Pan, D. K.,Guo, B. R.. 2007

[8]Molecular characterization and expression analysis of the porcine caveolin-3 gene. Zhu, Zhengmao,Li, Yong,Mo, Delin,Li, Kui,Zhao, Shuhong.

[9]Cytoplasmic polyhedrosis virus-induced differential gene expression in two silkworm strains of different susceptibility. Gao, Kun,Deng, Xiang-yuan,Gao, Kun,Qian, He-ying,Qin, Guang-xing,Hou, Cheng-xiang,Guo, Xi-jie,Gao, Kun,Qian, He-ying,Qin, Guang-xing,Hou, Cheng-xiang,Guo, Xi-jie.

[10]Molecular cloning and characterization of cotton cDNAs expressed in developing fiber cells. Guang-Rong ZHAO,Jin-Yuan LIU,Xiong-Ming DU. 2001

[11]Identification of differential gene expression profiles between winter dormant and sprouting axillary buds in tea plant (Camellia sinensis) by suppression subtractive hybridization. Wang, Xinchao,Hao, Xinyuan,Ma, Chunlei,Cao, Hongli,Yue, Chuan,Wang, Lu,Zeng, Jianming,Yang, Yajun,Wang, Xinchao,Hao, Xinyuan,Ma, Chunlei,Cao, Hongli,Yue, Chuan,Wang, Lu,Zeng, Jianming,Yang, Yajun,Hao, Xinyuan. 2014

[12]Comparative Transcriptomic Analysis Of The L.arval And Adult Stages O f Taenia Pisiformis. Zhang, SH. 2019

[13]Strand-specific RNA-Seq transcriptome analysis of genotypes with and without low-phosphorus tolerance provides novel insights into phosphorus-use efficiency in maize. Qingguo Du, Kai Wang, Cheng Xu, Cheng Zou, Chuanxiao Xie, Yunbi Xu & Wen-Xue Li. 2016

[14]Comparative transcriptome analysis reveals the molecular mechanism of salt tolerance in Apocynum venetum. Zongchang Xu,Meng Wang,Tingting Ren,Keyang Li,Yiqiang Li,Prince Marowa,Chengsheng Zhang. 2021

[15]Comparative transcriptome analysis of compatible and incompatible Brassica napus-Xanthomonas campestris interactions. Yang, Li,Zhao, Chuanji,Bai, Zetao,Yang, Lingli,Schranz, M. Eric,Liu, Shengyi,Bouwmeester, Klaas. 2022

[16]High-resolution genetic mapping of maize pan-genome sequence anchors. Lu, Fei,Romay, Maria C.,Glaubitz, Jeffrey C.,Elshire, Robert J.,Buckler, Edward S.,Bradbury, Peter J.,Buckler, Edward S.,Wang, Tianyu,Li, Yu,Li, Yongxiang,Semagn, Kassa,Zhang, Xuecai,Hernandez, Alvaro G.,Mikel, Mark A.,Mikel, Mark A.,Soifer, Ilya,Barad, Omer.

[17]Megabase Level Sequencing Reveals Contrasted Organization and Evolution Patterns of the Wheat Gene and Transposable Element Spaces. Choulet, Frederic,Rustenholz, Camille,Paux, Etienne,Salse, Jerome,Leroy, Philippe,Feuillet, Catherine,Wicker, Thomas,Keller, Beat,Schlub, Stephane,Le Paslier, Marie-Christine,Brunel, Dominique,Magdelenat, Ghislaine,Gonthier, Catherine,Couloux, Arnaud,Budak, Hikmet,Breen, James,Appels, Rudi,Pumphrey, Michael,Gill, Bikram S.,Liu, Sixin,Anderson, James A.,Kong, Xiuying,Jia, Jizeng,Gut, Marta.

[18]Shifts in the evolutionary rate and intensity of purifying selection between two Brassica genomes revealed by analyses of orthologous transposons and relics of a whole genome triplication. Zhao, Meixia,Tong, Chaobo,Yu, Jingyin,Huang, Shunmou,Liu, Shengyi,Zhao, Meixia,Du, Jianchang,Lin, Feng,Ma, Jianxin,Wang, Xiaowu. 2013

[19]SDG714, a histone H3K9 methyltransferase, is involved in Tos17 DNA methylation and transposition in rice. Ding, Yong,Wang, Xia,Su, Lei,Zhai, JiXian,Cao, ShouYun,Zhang, DongFen,Liu, ChunYan,Bi, YuPing,Qian, Qian,Cheng, ZhuKuan,Chu, ChengCai,Cao, XiaoFeng.

[20]Functional analysis of GUS expression patterns and T-DNA integration characteristics in rice enhancer trap lines. Peng, H,Huang, HM,Yang, YZ,Zhai, Y,Wu, JX,Huang, DF,Lu, TG.

作者其他论文 更多>>