数字农科院2.0

A one-pot CRISPR-Cas12a-based assay for rapid, on-site detection of African swine fever virus

文献类型： 外文期刊

作者： Xiaowei Gao;Xinying Dong;Hao Song;Yanhui Fu;Jing Li;Gaocheng Fan;Tao Wang;Yuan Sun;Yanjin Wang;Hua Ji Qiu;Yuzi Luo

作者机构：

关键词： African swine fever virus;On-site detection;RPA-CRISPR-Cas12a

期刊名称： International Journal of Biological Macromolecules

ISSN： 0141-8130

年卷期： 2025 年 321 卷

页码：

收录情况： SCIE（2025版） ; ; EI（2025版）

摘要： African swine fever (ASF), caused by African swine fever virus (ASFV), is a highly contagious and devastating disease threatening global swine production. The disease has caused substantial economic losses, driving the need for efficient diagnostic tools to enhance surveillance and control. Despite various available assays for ASF, field-deployable tools enabling rapid, accurate, and user-friendly detection remain urgently needed. Here, we developed and validated a novel one-pot recombinase polymerase amplification (RPA)-CRISPR-Cas12a assay for rapid and sensitive detection of ASFV by integrating all components into a single sealed tube, which requires only isothermal heating and ultraviolet visualization. The assay demonstrated a detection limit of 56 TCID50/mL and could be completed within 35 min, and without cross-reactivity with non-ASFV porcine viruses. In comparative testing of 150 clinical samples, the one-pot RPA-CRISPR-Cas12a assay exhibited 100 % agreement with gold standard quantitative PCR (qPCR). Notably, the assay identified ASFV genomic DNA in whole blood as early as 3 days post-infection with sensitivity comparable to the qPCR. This early detection capability, combined with a field-deployable format, provides a robust tool for implementing timely containment measures against ASF, especially in resource-limited setting.

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