数字农科院2.0

Identification And Analysis Of Differentially Expressed Long Non-Coding Rnas Of Chinese Holstein Cattle Responses To Heat Stress

文献类型： 外文期刊

作者： Li, QL; Qiao, J; Zhang, ZF; Shang, XL; Chu, ZD; Fu, YJ; Chu, MX

作者机构：

关键词： Chinese Holstein; Functional Prediction; Heat Stress; Long Non-Coding Rna

期刊名称： ANIMAL BIOTECHNOLOGY

ISSN： 1049-5398

年卷期： 2020 年 31 卷 1 期

页码：

收录情况： JCR（2021版） ; EI（2021版）

摘要： The mechanisms that dairy cattle respond to environmental stresses are very complicated. Previous research into the molecular mechanisms of mammalian heat stress has largely focused on the role of protein-coding genes and small non-coding RNAs. Recently, it has become apparent that large numbers of long non-coding RNAs transcribed from mammalian genomes play extensive roles in transcriptional regulation. However, the expression of lncRNAs and their biological functions in heat stress in dairy cattle remain unknown. In this study, we employed a deep RNA sequencing to examine lncRNA expression profiles of heat stressed and non-heat stressed Chinese Holstein cattle. We found that 24,795 novel and 3763 known lncRNAs were expressed in the bovine mammary gland, of which 174 were differentially expressed in heat stress condition, among them, 156 lncRNAs were up-regulated and 18 were down-regulated. Through Cis role analysis, 16,474 lncRNAs were transcribed close to protein-coding neighbors. In addition, 11 and 2024 lncRNAs harbored precursors of known and predicted microRNAs, respectively, were annotated in the precursor analysis of miRNAs. Taken together, our findings represent the first systematic investigation of lncRNA expression in heat stressed Chinese Holstein and provide a resource for further research into the molecular mechanisms of lncRNAs function in dairy cattle.

分类号：

  • 相关文献

[1]Genetic parameters for somatic cell score and production traits in the first three lactations of Chinese Holstein cows. Zhao Fu-ping,Guo Gang,Du Li-xin,Guo Gang,Guo Gang,Wang Ya-chun,Guo Xiang-yu,Zhang Yuan. 2015

[2]Genetic polymorphisms of TRAPPC9 and CD4 genes and their association with milk production and mastitis resistance phenotypic traits in Chinese Holstein. Khan M.Z.,Dari G.,Khan A.,Yu Y.. 2022

[3]Prediction Of Fecal Nitrogen And P.hosphorus Excretion For Chinese H olstein Lactating Dairy Cows. Qu, QB, Yang, P, Zhao, R, Zhi, SL, Zhai, ZW, Ding, FF, Zhang, KQ. 2017

[4]Target Of Rapamycin (Tor) Regulates T.he Expression Of Incrnas I n Response To Abiotic Stresses In Cotton. Yang, Zuoren,Li, Linxuan,Li, Fuguang,Ren, Maozhi,Wang, Lingling,Song, Yun,Yin, Huan,Li, Fuguang,Ge, Xiaoyang,Zheng, Lei,Zhuo, Fengping,Zhang, Chaojun,Zhao, Ge,Zheng, Lei,Zhang, Xueyan,Zhang, Chaojun,Zhang, Xueyan,Zhao, Ge,Yang, Zuoren,Yang, Zhaoen,Song, Yun,Ge, Xiaoyang,Yang, Zhaoen,Wang, Lingling. 2019

[5]A Transcriptomic Profile Of Topping Responsive Non-Coding Rnas In Tobacco Roots (Nicotiana Tabacum). Chen, Xi,Fan, Longjiang,Zhu, Qian-Hao,Liu, Lu,Shen, Enhui,Liu, Fangjie,Ye, Chuyu,Sun, Shuo,Cao, Peijian,Chen, Xi,Xiao, Bingguang,Liu, Fangjie,Fan, Longjiang,Timko, Michael P.. 2019

[6]The Antiphasic Regulatory Module Comprising C.df5 And Its Antisense R na Flore Links The Circadian Clock To Photoperiodic Flowering. Henriques, R, Wang, H, Liu, J, Boix, M, Huang, LF, Chua, NH. 2017

[7]Identification Of Novel Lncrnas Differentially Expressed In Placentas Of Chinese Ningqiang Pony And Yili Horse Breeds. Pu, YB, Zhang, YL, Zhang, T, Han, JL, Ma, YH, Liu, XX. 2020

[8]Lncrnanet: A Comprehensive Sus Scrofa L.ncrna Database. Yang, Y.,Li, H.,Yang, Y.,Li, K.,Yu, H.,Li, X.,Li, K.,Tang, Z.,Li, K.,Liang, G.,Li, X.,Yang, Y.,Li, X.,Tang, Z.. 2018

[9]First Identification Of Long Non-Coding R.nas In Fungal Parasite N osema Ceranae. Guo, R, Chen, DF, Xiong, CL, Hou, CS, Zheng, YZ, Fu, ZM, Liang, Q, Diao, QY, Zhang, L, Wang, HQ, Hou, ZX, Kumar, D. 2018

[10]Integrated Analysis Of Long Non-Coding Rnas (Lncrnas) And Mrnas Reveals The Regulatory Role Of Lncrnas Associated With Salt Resistance In Camellia Sinensis. Wan, SQ, Zhang, YH, Duan, MS, Huang, LL, Wang, WD, Xu, QS, Yang, YJ, Yu, YB. 2020

[11]Role of microRNA and long non-coding RNA in Marek's disease tumorigenesis in chicken. Zhaobo Zhang,Sishi Zhang,Guoshuai Wang,Siyu Feng,Kexin Han,Limei Han,Liping Han. 2021

[12]IRLnc: a novel functional noncoding RNA contributes to intramuscular fat deposition. Ligang Wang,Zhong-Yin Zhou,Tian Zhang,Longchao Zhang,Xinhua Hou,Hua Yan,Lixian Wang. 2021

[13]Targeting Hsp20 Using The Novel S.mall Non-Coding Rna Dnrh R egulates Heat Tolerance In Deinococcus Radiodurans. Li, Jiang,Liu, Yingying,Zhou, Zhengfu,Xue, Dong,Jiang, Shijie,Chen, Yun,Ongena, Marc,Chen, Yun,Xue, Dong,Han, Jiahui,Wang, Jin,Chen, Ming,Zhang, Wei,Lin, Min. 2019

[14]Comparative Transcriptome Analysis To Elucidate T.he Enhanced Thermotolerance Of T ea Plants (Camellia Sinensis) Treated With Exogenous Calcium. Zhang, Xuyang,Wang, Mingle,Li, Xinghui,Li, Qinghui,Chen, Xuan. 2019

[15]Heat Stress-Reduced Kernel Weight In R.ice At Anthesis Is A ssociated With Impaired Source-Sink Relationship And Sugars Allocation. Li, Guang-Yan,Chen, Ting-Ting,Li, Hu-Bo,Jin, Qian-Yu,Fu, Guan-Fu,Feng, Bao-Hua,Tao, Long-Xing,Fu, Wei-Meng,Zhang, Cai-Xia. 2018

[16]Identification Of Qtls Associated With H.eat Tolerance At The H eading And Flowering Stage In Rice (Oryza Sativa L.). Liu, Jin,Wu, Jin-wen,Song, Youchun,Shin, Dongjin,Yu, Li-qin,Park, Dong-Soo,Li, Xia,Jo, Su-min,Li, Mao-mao,Ma, Xiao-ding,Li, Mao-mao,Li, Hui,Han, Long-zhi. 2018

[17]Research Progress On Heat Stress O.f Rice At Flowering S tage. Wang Yaliang,Zhu Defeng,Zhou Jianxia,Zhang Yikai,Zeng Yongjun,Zhang Yuping,Shi Qinghua,Wang Yaliang,Wang Lei,Xiang Jing,Hu Shengbo,Chen Huizhe. 2019

[18]Genome-Wide Association Mapping And Genomic P.rediction Analyses Reveal The G enetic Architecture Of Grain Yield And Flowering Time Under Drought And Heat Stress Conditions In Maize. Magorokosho, Cosmos,Hao, Zhuanfang,Makumbi, Dan,Liu, Yubo,Lu, Yanli,Gowda, Manje,Olsen, Michael S.,Cairns, Jill E.,Babu, Raman,Babu, Raman,Wang, Nan,Wang, Nan,Zhang, Xuecai,Prasanna, Boddupalli M.,San Vicente, Felix,Yuan, Yibing,Lu, Yanli,Yuan, Yibing,Yuan, Yibing,Zhang, Ao. 2019

[19]Unconventional Splicing Of Wheat Tabzip60 C.onfers Heat Tolerance In T ransgenic Arabidopsis. Geng, Xiaoli,Zhao, Aiju,Zang, Xinshan,Geng, Xiaoli,Li, Haoran,Liu, Jian,Hu, Zhaorong,Ni, Zhongfu,Peng, Huiru,Sun, Qixin,Liu, Zhenshan,Zang, Xinshan,Yao, Yingyin,Xin, Mingming. 2018

[20]Alternative Splicing In Tea Plants Was Extensively Triggered By Drought, Heat And Their Combined Stresses. Ding, Zhaotang,Qiu, Chen,Xie, Hui,Wang, Yu,Ding, Yiqian,Qian, Wenjun. 2020

作者其他论文 更多>>