数字农科院2.0

Characterization of novel polymorphic genomic microsatellite markers of Boehmeria tricuspis (Hance) Makino

文献类型: 外文期刊

作者: Tang, Q.;Chen, J. H.;Zang, G. G.;Luan, M. B.

作者机构:

关键词: Boehmeria tricuspis (Hance) Makino;SSR;SLAF

期刊名称: GENETICS AND MOLECULAR RESEARCH

ISSN: 1676-5680

年卷期: 2016 年 15 卷 2 期

页码:

收录情况: SCI

摘要: In the present study, 59 polymorphic microsatellite loci of Boehmeria tricuspis (Hance) Makino were developed from the specific length amplified fragment sequencing data library of genome. The number of alleles per locus ranged from two to five, and the observed and expected heterozygosities ranged from 0.0000 to 1.0000 and from 0.0769 to 0.6751, respectively. Among the 59 loci, 25 displayed significant deviations from Hardy-Weinberg expectations (P < 0.05). The developed simple sequence repeat markers should be useful for studying population genetics in B. tricuspis (Hance) Makino, for providing further knowledge on its population differentiation, breeding system, and dispersal ability, as well as quantitative trait locus mapping. These markers could also be valuable genetic resources for closely related species.

分类号:

  • 相关文献

[1]采用SLAF - seq技术开发甘蓝型油菜霜霉病抗性SNP位点. 王伟,刘凡,任莉,徐理,陈旺,曾令益,黄炳文,方小平. 2016

[2]葡萄果粒形状简化基因组关联分析. 张恒,刘众杰,樊秀彩,张川,崔力文,刘崇怀,房经贵. 2017

[3]采用SLAF-seq技术开发甘蓝型油菜霜霉病抗性SNP位点. 王伟,刘凡,任莉,徐理,陈旺,曾令益,黄炳文,方小平. 2016

[4]Genome-Wide Single-Nucleotide Polymorphisms Discovery and High-Density Genetic Map Construction in Cauliflower Using Specific-Locus Amplified Fragment Sequencing. Zhao, Zhending,Gu, Honghui,Sheng, Xiaoguang,Yu, Huifang,Wang, Jiansheng,Huang, Long,Wang, Dan. 2016

[5]Identification, evaluation, and application of the genomic-SSR loci in ramie. Luan, Ming-Bao,Yang, Ze-Mao,Zhu, Juan-Juan,Deng, Xin,Liu, Chen-Chen,Wang, Xiao-Fei,Xu, Ying,Sun, Zhi-Min,Chen, Jian-Hua. 2016

[6]A intervarietal genetic map and QTL analysis for yield traits in wheat. Li, Sishen,Jia, Jizeng,Wei, Xianyun,Zhang, Xiaocun,Li, Linzhi,Chen, Haimei,Fan, Yuding,Sun, Haiyan,Zhao, Xinhua,Lei, Tiandong,Xu, Yunfong,Jiang, Fangshan,Wang, Honggang,Li, Lihui. 2007

[7]On the use of SSR markers for the genetic characterization of the Agropyron cristatum (L.) Gaertn. in Northern China. Che, Y. H.,Li, H. J.,Yang, X. M.,Li, X. Q.,Li, L. H.,Che, Y. H.,Yang, Y. P.. 2008

[8]Genetic structure and eco-geographical differentiation of cultivated Hsien rice (Oryza sativa L. subsp indica) in China revealed by microsatellites. Zhang DongLing,Zhang HongLiang,Qi YongWen,Wang MeiXing,Sun JunLi,Li ZiChao,Zhang DongLing,Zhang HongLiang,Qi YongWen,Wang MeiXing,Sun JunLi,Li ZiChao,Ding Li. 2013

[9]QTL mapping of coleorhiza length in maize (Zea mays L.) under two germination environmental conditions. Jiang, Xuwen,Tian, Baohua,Zhang, Weimin,Wang, Guoying,Wang, Jianhua,Jiang, Xuwen,Tian, Baohua,Zhang, Weimin,Wang, Guoying,Wang, Jianhua,Wang, Guoying. 2011

[10]Homologous analysis of SSR-ESTs and transferability of wheat SSR-EST markers across barley, rice and maize. Tang, Jifeng,Gao, Lifeng,Cao, Yongsheng,Jia, Jizeng. 2006

[11]The detection of QTLs controlling bacterial wilt resistance in tobacco (N-tabacum L.). Qian, Yi-liang,Yao, Da-nian,Qian, Yi-liang,Zu, Chao-long,Gao, Zheng-liang,Sun, Xue-yong,Wang, Xin-sheng,Wang, Da-zhou,Zhang, Hong-jun,Zhang, Hong-jun,Wang, Zhi-yong. 2013

[12]Efficient multiplex simple sequence repeat genotyping of the oomycete plant pathogen Phytophthora infestans. Li, Ying,Cooke, David E. L.,Li, Ying,Jacobsen, Evert,Li, Ying,van der Lee, Theo. 2013

[13]Genetic diversity of Agropyron mongolicum Keng indigenous to northern China. Che Yong-He,Yang Yan-Ping,Yang Xin-Ming,Li Xiu-Quan,Li Li-Hui. 2011

[14]Identification and Analysis of Genetic Diversity Structure Within Pisum Genus Based on Microsatellite Markers. Zong Xu-xiao,Guan Jian-ping,Wang Shu-min,Ford, Rebecca,Redden, Robert R.. 2009

[15]Genetic relationships among CIMMYT subtropical QPM and Chinese maize inbred lines based on SSRS. Li, M. S.,Li, X. H.,Salvi, S.,Tuberosa, R.,Yuan, L. X.,Rotono, F.,Bai, L.,Zhang, S. H.. 2006

[16]Analysis of simple sequence repeats in rice bean (Vigna umbellata) using an SSR-enriched library. Wang, Lixia,Chen, Honglin,Wang, Suhua,Cheng, Xuzhen,Kim, Kyung Do,Gao, Dongying,Jackson, Scott A.,Lee, Sukha. 2016

[17]Genetic diversity assessment using simple sequence repeats (SSR) and sequence-related amplified polymorphism (SRAP) markers in ramie. Luan, Ming-Bao,Zhu, Juan-Juan,Wang, Xiao-Fei,Xu, Ying,Sun, Zhi-Min,Chen, Jian-Hua,Zou, Zi-Zheng.

[18]Identification of Quantitative Trait Loci (QTLs) for Flowering Time Using SSR Marker in Maize under Water Stress. Xiao, YN,Li, XH,Zhang, SH,Wang, XD,Li, MS,Zheng, YL.

[19]Analysis of Genetic Diversity in Synthetic Wheat Assemblage (T. turgidumxAegilops tauschii; 2n=6x=42; AABBDD) for Winter Wheat Breeding. Hanif, Uzma,Kazi, Alvina Gul,Afzal, Fakiha,Khalid, Maria,Rasheed, Awais,Munir, Muhammad,Mujeeb-Kazi, Abdul.

[20]Genetic Diversity of Source Germplasm of Upland Cotton in China as Determined by SSR Marker Analysis. CHEN Guang,DU Xiong-Ming. 2006

作者其他论文 更多>>