数字农科院2.0

Draft genome resource of fusarium oxysporum f. sp. capsici, the infectious agent of pepper fusarium wilt

文献类型： 外文期刊

作者： Ping Xingxing;Raja Asad Ali Khan;Li Yan;Yang Yuhong;Xie Bingyan;Mao Zhenchuan;Ling Jian

作者机构：

关键词： Fusarium oxysporum f. sp. capsici;Fusarium wilt;Genome;Pepper

期刊名称： Molecular Plant-Microbe Interactions

ISSN： 0894-0282

年卷期： 2021 年 34.0 卷 6.0 期

页码：

收录情况： JCR（2021版）

摘要： Fusarium oxysporum f. sp. capsici is the specific pathogen of pepper Fusarium wilt and causes a significant reduction in pepper yield. Its narrow host specificity has led to the concept of formae speciales. This interesting phenomenon has great potential and needs to be analyzed at the molecular level. In this study, we obtained the draft genome sequence of F. oxysporum f. sp. capsici, using the Oxford Nanopore sequencing technology. The long read-based assembly consisted of 34 contigs, with a total length of 54,516,562 bp. The contig N50 was 4,962,668 bp and the GC content was 47.6%. Our genome assembly of F. oxysporum f. sp. capsici provides a valuable resource for the study of pepper Fusarium wilt, and the comparative genomic study of F. oxysporum.

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