数字农科院2.0

Genome-wide association mapping and candidate genes analysis of high-throughput image descriptors for wheat frost tolerance

文献类型： 外文期刊

作者： Rui Yu;Yixue Liu;Meng Yuan;Pingtao Jiang;Jiwen Zhao;Chuanliang Zhang;Xiaowan Xu;Qilin Wang;Yuze Wang;Tiantian Chen;Jingrui Ou;Yihang Luo;Haitao Dong;Zhensheng Kang;Qingdong Zeng;Yusheng Zhao;Shouyang Liu;Baofeng Su;Dejun Han;Jianhui Wu

作者机构：

关键词： Frost;GS (genomic selection);GWAS (genome-wide association study);Image;Wheat

期刊名称： Stress Biology

ISSN：

年卷期： 2025 年 5 卷 1 期

页码：

收录情况： CSCD（2025-2026年度） ; ; ESCI（2025版）

摘要： Repeated occurrences of extreme weather events, such as low temperatures, due to global warming present a serious risk to the safety of wheat production. Quantitative assessment of frost damage can facilitate the analysis of key genetic factors related to wheat tolerance to abiotic stress. We collected 491 wheat accessions and selected four image-based descriptors (BLUE band, RED band, NDVI, and GNDVI) to quantitatively assess their frost damage. Image descriptors can complement the visual estimation of frost damage. Combined with genome-wide association study (GWAS), a total of 107 quantitative trait loci (QTL) (r2 ranging from 0.75% to 9.48%) were identified, including the well-known frost-resistant locus Frost Resistance (FR)-A1/ Vernalization (VRN)-A1. Additionally, through quantitative gene expression data and mutation experience verification experiments, we identified two other frost tolerance candidate genes TraesCS2A03G1077800 and TraesCS5B03G1008500. Furthermore, when combined with genomic selection (GS), image-based descriptors can predict frost damage with high accuracy (r ≤ 0.84). In conclusion, our research confirms the accuracy of image-based high-throughput acquisition of frost damage, thereby supplementing the exploration of the genetic structure of frost tolerance in wheat within complex field environments.

分类号：

  • 相关文献

[1]充分发掘保护利用生物多样性;促进农业可持续发展——《生物多样性与小麦改良》简评. 李祥洲. 1997

[2]Genome-wide association analysis reveal candidate genes and haplotypes related to root weight in cucumber (Cucumis sativus L.). Zhuonan Dai,Shaoyun Dong,Hexu Cai,Diane M. Beckles,Jiantao Guan,Xiaoping Liu,Xingfang Gu,Han Miao,Shengping Zhang. 2024

[3]SIMULATION AND EXPERIMENT OF MONORAIL ANTI-FROST MACHINE IN HILLY ORCHARD. Gong, Qingfu,Song, Yuepeng,Ma, Wei,Zhang, Hongmei,Han, Xiang,Gao, Ang,Ren, Longlong. 2024

[4]30个小麦新品系抗条锈病基因分析及成株期抗病性评价. 冯晶,蔺瑞明,林凤,徐世昌. 2013

[5]小麦抗菌蛋白编码基因BS108的克隆及其转基因抗病小麦的创制. 李钊,周淼平,张增艳,庄洪涛,徐惠君,杜丽璞,叶兴国. 2010

[6]渗透调节物质及有机附加物对小麦体细胞胚发生影响的研究(英文). 孙朝霞,侯思宇,王玉国. 2008

[7]普通小麦品种辐射敏感性模糊聚类分析<英文>. 冯志杰,王琳清. 1992

[8]基因枪转化小麦主要轰击参数的优化. 闵东红,何莎,张彦,夏兰琴. 2013

[9]小麦矮缩病毒分子群体遗传结构研究. 刘艳,王锡锋,周广和. 2008

[10]Folate Content Analysis Of Wheat C.ultivars Developed In The N orth China Plain. Zhang, Chunyi,Riaz, Bisma,Ye, Xingguo,Wan, Xing,Liang, Qiuju,Wang, Ke. 2019

[11]Physical Information Of 2705 Pcr-Based M.olecular Markers And The E valuation Of Their Potential Use In Wheat. Zhang, Mengna,Sun, Han,Cui, Fa,Wu, Yongzhen,Zhang, Qianqian,Jiang, Xiaomin,Liu, Mengmeng,Cui, Junpeng,Guan, Chunhui,Zhao, Chunhua,Hou, Yuzhu,Han, Dejun,Guo, Qifan,Xiang, Mingjie,Luo, Xiulong. 2019

[12]Identification Of Novel Alleles Induced B.y Ems-Mutagenesis In Key G enes Of Kernel Hardness And Starch Biosynthesis In Wheat By Tilling. Xie, Yongdun,Wang, Yongbin,Zhao, Baocun,Zhao, Shirong,Zhao, Linshu,Wang, Guangjin,Guo, Huijun,Gu, Jiayu,Li, Wenjie,Liu, Luxiang,Li, Wenjie. 2017

[13]Unconventional Splicing Of Wheat Tabzip60 C.onfers Heat Tolerance In T ransgenic Arabidopsis. Geng, Xiaoli,Zhao, Aiju,Zang, Xinshan,Geng, Xiaoli,Li, Haoran,Liu, Jian,Hu, Zhaorong,Ni, Zhongfu,Peng, Huiru,Sun, Qixin,Liu, Zhenshan,Zang, Xinshan,Yao, Yingyin,Xin, Mingming. 2018

[14]Development Of A High-Efficient Mutation R.esource With Phenotypic Variation I n Hexaploid Winter Wheat And Identification Of Novel Alleles In The Taagp.L-B1 Gene. Zhao Shirong,Xiong Hongchun,Li Xiao,Zhao Linshu,Yan Xiaoli,Xie Yongdun,Gu Jiayu,Guo Huijun,Liu, Luxiang,Liu Yunchuan. 2017

[15]Fine Mapping Of A Novel H.eading Date Gene, Tahdm605, I n Hexaploid Wheat. Jia, Jizeng,Liu, Xu,Liu, Guoxiang,Kong, Xiuying,Xia, Chuan,Zhang, Lichao,Zhang, Xueying,Zhao, Tianxiang. 2018

[16]Effects of inorganic fertilizer inputs on grain yields and soil properties in a long-term wheat-corn cropping system in south China. Zhang, Huimin,Wang, Boren,Xu, Minggang,Zhang, Huimin,Wang, Boren,Xu, Minggang,Zhang, Huimin. 2008

[17]Precise mapping of a quantitative trait locus interval for spike length and grain weight in bread wheat (Triticum aestivum L.). Wu, Xinyi,Cheng, Ruiru,Xue, Shulin,Kong, Zhongxin,Wan, Hongshen,Li, Guoqiang,Huang, Yulong,Jia, Haiyan,Zhang, Lixia,Ma, Zhengqiang,Jia, Jizeng. 2014

[18]Identification and Validation of a Major Quantitative Trait Locus for Slow-rusting Resistance to Stripe Rust in Wheat. Cao, Xiaohua,Zhou, Jianghong,Gong, Xiaoping,Qi, Xiaoquan,Cao, Xiaohua,Zhao, Guangyao,Jia, Jizeng. 2012

[19]Estimating nutrient uptake requirements for wheat in China. Chuan, Limin,He, Ping,Jin, Jiyun,Li, Shutian,Xu, Xinpeng,Qiu, Shaojun,Zhao, Shicheng,Zhou, Wei,He, Ping,Jin, Jiyun,Li, Shutian,Grant, Cynthia. 2013

[20]Comparative Proteomic Analysis of Spike-Development Inhibited and Normal Tillers of Wheat 3558. Zheng Yong-sheng,Gao Ai-nong,Li Li-hui,Liu Wei-hua,Ma Xiao-gang,Chi De-zhao. 2013

作者其他论文 更多>>