[1]DeepSATA: A Deep Learning-Based Sequence Analyzer Incorporating the Transcription Factor Binding Affinity to Dissect the Effects of Non-Coding Genetic Variants. Ma, Wenlong,Fu, Yang,Bao, Yongzhou,Wang, Zhen,Lei, Bowen,Zheng, Weigang,Wang, Chao,Liu, Yuwen. 2023

[2]Fast-forwarding plant breeding with deep learning-based genomic prediction. Gao, Shang,Yu, Tingxi,Rasheed, Awais,Wang, Jiankang,Crossa, Jose,Hearne, Sarah,Li, Huihui. 2025

[3]MtCro: multi-task deep learning framework improves multi-trait genomic prediction of crops. Chao, Dian,Wang, Hao,Wan, Fengqiang,Yan, Shen,Fang, Wei,Yang, Yang. 2025

[4]A comparative study highlights superiority of LSTM in crop genomic prediction. Ruiqing Pan,Yaolong Yang,Yuanyuan Zhang,Qun Xu,Yue Feng,Junyu Chen,Wei Li,Shoupu He,Xinghua Wei,Mengchen Zhang. 2025

[5]Chilling-induced peach flavor loss is associated with expression and DNA methylation of functional genes. Duan, Wenyi,Yang, Can,Cao, Xiangmei,Wei, Chunyan,Chen, Kunsong,Li, Xian,Zhang, Bo. 2023

[6]Interspecies Conservation of Gene Expression Patterns in Brassica Reproductive Organs Unveiled by Comparative Transcriptomics. Chen, Haixu,Cai, Xu,Wu, Jian,Hou, Xilin,Wang, Xiaowu. 2025

[7]Accuracy of genomic prediction using low-density marker panels. Zhang, Z.,Ding, X.,Liu, J.,Zhang, Q.,Zhang, Z.,de Koning, D. -J.,Zhang, Z.,de Koning, D. -J.,de Koning, D. -J..

[8]Canine hip dysplasia is predictable by genotyping. Zhang, Z.,Guo, G.,Wang, Y.,Zhang, Y.,Guo, G.,Zhou, Z.,Li, J.,Zhou, Z.,Hunter, L.,Friedenberg, S.,Krotscheck, U.,Todhunter, R.,Zhu, L.,Lust, G.,Harris, S.,Jones, P.,Sandler, J.,Zhao, K.,Zhou, Z.. 2011

[9]Effects Of Marker Density And M.inor Allele Frequency On G enomic Prediction For Growth Traits In Chinese Simmental Beef Cattle. Zhu, B, Zhang, JJ, Niu, H, Guan, L, Guo, P, Xu, LY, Chen, Y, Zhang, LP, Gao, HJ, Gao, X, Li, JY. 2017

[10]Improving Genomic Prediction with Machine Learning Incorporating TPE for Hyperparameters Optimization. Liang, Mang,An, Bingxing,Li, Keanning,Du, Lili,Deng, Tianyu,Cao, Sheng,Du, Yueying,Xu, Lingyang,Gao, Xue,Zhang, Lupei,Li, Junya,Gao, Huijiang. 2022

[11]Sparse Phenotyping and Haplotype-Based Models for Genomic Prediction in Rice. Sang He,Shanshan Liang,Lijun Meng,Liyong Cao,Guoyou Ye. 2023

[12]Genomic Prediction Across Structured Hybrid Populations and Environments in Maize. Li D, Xu Z, Gu R, Wang P, Xu J, Du D, Fu J, Wang J, Zhang H, Wang G. 2021

[13]Genomic Prediction Using LD-Based Haplotypes Inferred From High-Density Chip and Imputed Sequence Variants in Chinese Simmental Beef Cattle. Hongwei Li,Bo Zhu,Ling Xu,Zezhao Wang,Lei Xu,Peinuo Zhou,Han Gao,Peng Guo,Yan Chen,Xue Gao,Lupei Zhang,Huijiang Gao,Wentao Cai,Lingyang Xu,Junya Li. 2021

[14]Evaluation of Bayesian alphabet and GBLUP based on different marker density for genomic prediction in Alpine Merino sheep. Shaohua Zhu,Tingting Guo,Chao Yuan,Jianbin Liu,Jianye Li,Mei Han,Hongchang Zhao,Yi Wu,Weibo Sun,Xijun Wang,Tianxiang Wang,Jigang Liu,Christian Keambou Tiambo,Yaojing Yue,Bohui Yang. 2021

[15]Genomic Prediction Across Structured Hybrid Populations and Environments in Maize. Li D, Xu Z, Gu R, Wang P, Xu J, Du D, Fu J, Wang J, Zhang H, Wang G. 2021

[16]Improving Selection Efficiency of Crop Breeding With Genomic Prediction Aided Sparse Phenotyping. Sang He,Yong Jiang,Rebecca Thistlethwaite,Matthew J. Hayden,Richard Trethowan,Hans D. Daetwyler. 2021

[17]Genomic prediction using composite training sets is an effective method for exploiting germplasm conserved in rice gene banks. He, Sang,Liu, Hongyan,Zhan, Junhui,Meng, Yun,Wang, Yamei,Wang, Feng,Ye, Guoyou. 2022

[18]Comparison of genomic prediction methods for residual feed intake in broilers. He, Zhengxiao,Li, Sen,Li, Wei,Ding, Jiqiang,Zheng, Maiqing,Li, Qinghe,Fahey, Alan G.,Wen, Jie,Liu, Ranran,Zhao, Guiping. 2022

[19]Validation of the prediction accuracy for 13 traits in Chinese simmental beef cattle using a preselected low-density SNP panel. Ling Xu,Qunhao Niu,Yan Chen,Zezhao Wang,Lei Xu,Hongwei Li,Lingyang Xu,Xue Gao,Lupei Zhang,Huijiang Gao,Wentao Cai,Bo Zhu,Junya Li. 2021

[20]Incorporating Genome Annotation Into Genomic Prediction For Carcass Traits In Chinese Simmental Beef Cattle. Xu, L, Gao, N, Wang, ZZ, Xu, L, Liu, Y, Chen, Y, Xu, LY, Gao, X, Zhang, LP, Gao, HJ, Zhu, B, Li, JY. 2020