数字农科院2.0

Efficient site-specific integration of kilobase-length DNA fragments in plant cells via Kp03 recombinase

文献类型: 外文期刊

作者: Daqi Yan;Yanyan Meng;Nan Zhang;Yali Zhao;Conghui Ning;Lina Zhu;Yuntong Liu;Jing Wang;Chunyu Li;Xuehong Shen;Dan Yang;Tianyu Zhang;Yang Liu;Sujie Zhang;Jingqi Du;Huanbin Zhou;Yanlin Liu;Haodong Chen;Tongda Xu;Xiaoyue Zhu;Mingzhang Wen;Yan Xiong

作者机构:

关键词: Arabidopsis;CP: Plants;Kp03;large DNA insertion;large serine recombinase;rice;synthetic biology

期刊名称: Cell Reports

ISSN: 2639-1856

年卷期: 2025 年 44 卷 11 期

页码:

收录情况: SCIE(2025版)

摘要: Targeted insertion of large DNA sequences into plant genomes remains a major challenge in synthetic biology. Here, we evaluate the large serine recombinase Kp03 for site-specific integration of DNA fragments in rice and Arabidopsis. In transient protoplast assays, Kp03 mediates efficient insertion of donor DNA up to 27.3 kilobases (kb), with plasmid integration efficiencies reaching 99.1% for fragments up to 3.4 kb. Truncation experiments reveal that a minimal 15-bp attB sequence is necessary for integration. As a proof of concept, Kp03 successfully incorporates a 3.4-kb donor DNA into the rice genome at a locus containing this minimal attB sequence. Moreover, in rice callus, combining Kp03 with the NM-PE genome editing system to install a 26-bp attB site enables targeted integration of a 3.4-kb donor at the desired genomic locus. These findings establish Kp03 as a versatile tool for plant genome engineering, with broad applications for synthetic biology.

分类号:

  • 相关文献

[1]The rice peroxisomal receptor PEX5 negatively regulates resistance to rice blast fungus Magnaporthe oryzae. Xiaoman You,Shanshan Zhu,Haowen Sheng,Zheng Liu,Dan Wang,Min Wang,Xiao Xu,Feng He,Hong Fang,Fan Zhang,Debao Wang,Zeyun Hao,Ruyi Wang,Yinghui Xiao,Jianmin Wan,Guo Liang Wang,Yuese Ning. 2023

[2]Carbon-positive photorespiratory bypass via the tartronyl-coenzyme A pathway enhances carbon fixation efficiency and yield in rice. Chen, Guoxin,Jin, Kaining,Wang, Jingke,Li, Yanni,Tian, Xinhua,Zhang, Liying,Wu, Suting,Yang, Jinwen,Cui, Xuean,Sun, Jing,Sun, Xuehui,Lu, Tiegang,Zhang, Zhiguo. 2025

[3]四种甘蓝雄性不育类型基因芯片表达谱分析. 康俊根,王晓武,方智远. 2007

[4]水稻淡褐斑叶突变体lbsll的遗传分析与基因定位. 奉保华,杨杨,施勇烽,林璐,陈洁,黄奇娜,魏彦林,HeiLEUNG,吴建利. 2012

[5]OsBTF3转基因水稻对病原茵侵染的反应和防卫基因的表达分析. 陈华民,吴茂森,何晨阳. 2012

[6]Antagonistic HLH/bHLH Transcription Factors Mediate Brassinosteroid Regulation of Cell Elongation and Plant Development in Rice and Arabidopsis. Zhang, Li-Ying,Bai, Ming-Yi,Zhu, Jia-Ying,Wang, Hao,Wang, Wenfei,Zhao, Jun,Yang, Hongjuan,Xu, Yunyuan,Lin, Wen-Hui,Chong, Kang,Wang, Zhi-Yong,Zhang, Li-Ying,Zhu, Jia-Ying,Wang, Hao,Wang, Wenfei,Zhao, Jun,Bai, Ming-Yi,Sun, Yu,Wang, Zhi-Yong,Wu, Jinxia,Zhang, Zhiguo,Sun, Xuehui,Lu, Tiegang,Kim, Soo-Hwan,Fujioka, Shozo.

[7]Iron nutrition affects cadmium accumulation and toxicity in rice plants. Shao, Guosheng,Chen, Mingxue,Wang, Weixia,Mon, Renxiang,Zhang, Guoping.

[8]MicroRNA171a regulates plant development and enhances drought stress tolerance. Zhang J.,Wang L.,Xue M.,Gan L.,Pei X.. 2024

[9]The OsbHLH002/OsICE1-OSH1 module orchestrates secondary cell wall formation in rice. Ying Chen,Haoyue Qi,Lijia Yang,Liang Xu,Jiaxuan Wang,Jiazhuo Guo,Liang Zhang,Yuanyuan Tan,Ronghui Pan,Qingyao Shu,Qian Qian,Shiyong Song. 2023

[10]Haplotype mapping of H3K27me3-associated chromatin interactions defines topological regulation of gene silencing in rice. Weizhi Ouyang,Xiwen Zhang,Minrong Guo,Jing Wang,Xiaoting Wang,Runxin Gao,Meng Ma,Xu Xiang,Shiping Luan,Feng Xing,Zhilin Cao,Jiapei Yan,Guoliang Li,Xingwang Li. 2023

[11]A VQ-motif-containing protein fine-tunes rice immunity and growth by a hierarchical regulatory mechanism. Hao Z.,Tian J.,Fang H.,Fang L.,Xu X.,He F.,Li S.,Xie W.,Du Q.,You X.,Wang D.,Chen Q.,Wang R.,Zuo S.,Yuan M.,Wang G.-L.,Xia L.,Ning Y.. 2022

[12]Next-generation bulked segregant analysis for Breeding 4.0. Xi Wang,Linqian Han,Juan Li,Xiaoyang Shang,Qian Liu,Lin Li,Hongwei Zhang. 2023

[13]Control of grain size in rice by TGW3 phosphorylation of OsIAA10 through potentiation of OsIAA10-OsARF4-mediated auxin signaling. Ming Ma,Shao Yan Shen,Chen Bai,Wei Qing Wang,Xiao Hui Feng,Jie Zheng Ying,Xian Jun Song. 2023

[14]Expression of a mycoparasite protease in plant petals suppresses the petal-mediated infection by necrotrophic pathogens. Yongchun Wang,Han Yu,Yuping Xu,Mingde Wu,Jing Zhang,Kenichi Tsuda,Shengyi Liu,Daohong Jiang,Weidong Chen,Yangdou Wei,Guoqing Li,Long Yang. 2023

[15]Trichoderma-secreted anthranilic acid promotes lateral root development via auxin signaling and RBOHF-induced endodermal cell wall remodeling. Yu Chen,Yansong Fu,Yanwei Xia,Youzhi Miao,Jiahui Shao,Wei Xuan,Yunpeng Liu,Weibing Xun,Qiuyan Yan,Qirong Shen,Ruifu Zhang. 2024

[16]The Idesia polycarpa genome provides insights into its evolution and oil biosynthesis. Yi Zuo,Hongbing Liu,Bin Li,Hang Zhao,Xiuli Li,Jiating Chen,Lu Wang,Qingbo Zheng,Yuqing He,Jiashuo Zhang,Minxian Wang,Chengzhi Liang,Lei Wang. 2024

[17]The Exserohilum turcicum effector EtEC81 reprograms alternative splicing in maize and activates immunity. Haiyue Yu,Xuetao Shi,Na Ning,Hongliang Wu,Jie Mei,Xiaoyu Gu,Hongchun Ruan,Mingcai Zhang,Zhiqiang Li,Shoucai Ma,Wende Liu. 2025

[18]A rhizobacterium-secreted protein induces lateral root development through the IAA34-PUCHI pathway. Yansong Fu,Yunpeng Liu,Yu Chen,Jintao Xiao,Yuanming Xie,Youzhi Miao,Zhihui Xu,Nan Zhang,Weibing Xun,Wei Xuan,Qirong Shen,Ruifu Zhang. 2025

[19]The tetraploid Camellia oleifera genome provides insights into evolution, agronomic traits, and genetic architecture of oil Camellia plants. Lin Zhang,Yan Shi,Wenfang Gong,Guang Zhao,Shixin Xiao,Hai Lin,Yanmin Li,Zhenyang Liao,Shengcheng Zhang,Guanxing Hu,Ziqi Ye,Haifeng Wang,Zhiqiang Xia,Yekun Yang,Heping Cao,Shengjun Zhong,Xingtan Zhang,Deyi Yuan. 2024

[20]Time-resolved single-cell atlas identifies the spatiotemporal transcription dynamics in vernalization response in Brassica rapa. Zhicheng Zhang,Xu Cai,Jianli Liang,Jiahe Liu,Jing Guo,Wencai Yang,Xiaowu Wang,Jian Wu. 2025

作者其他论文 更多>>