数字农科院2.0

Genome-Wide Association Study of Immune Indices in Yaks

文献类型: 外文期刊

作者: Daoning Yu;Xiaoming Ma;Chun Huang;Tong Wang;Mengfan Zhang;Fen Feng;Xiaoyun Wu;Yongfu La;Xian Guo;Ping Yan;Derong Zhang;Chunnian Liang

作者机构:

关键词: GWAS;immune indices;resequencing;SNP;yak

期刊名称: Animals

ISSN: 2076-2615

年卷期: 2025 年 15 卷 14 期

页码:

收录情况: SCIE(2025版)

摘要: The yak is a vital livestock resource on the Qinghai–Tibet Plateau, renowned for its strong disease resistance and high-quality meat. However, various diseases pose significant threats to its health and lead to substantial economic losses. Current feeding management practices, along with available drugs and vaccines, have demonstrated limited effectiveness in preventing and controlling infectious diseases. Additionally, challenges such as drug resistance and the safety of animal products persist. Therefore, enhancing the disease-resistant breeding capacity of yaks is crucial. In this study, we examined 192 yaks by measuring the concentrations of 10 immune indicators in serum by using the ELISA method and conducting whole-genome resequencing, which identified 19,182,942 SNP loci. Through genome-wide association analysis, we detected 323 significant SNPs located near or within 125 candidate genes, most of which are associated with disease and significantly enriched in the TGF-β signaling pathway. Overall, our study identified a series of novel variants and candidate genes associated with disease resistance traits in yaks, providing important information for the molecular breeding of disease resistance in yaks. These results not only contribute to a deeper understanding of the function of disease resistance genes in yaks but also hold great potential for accelerating precision disease resistance breeding in yaks.

分类号:

  • 相关文献

[1]低磷胁迫下大豆苗期根系性状全基因组关联分析. 孙畅,刘美玲,刘子君,杨光,梁腾月,周宣汝,赵悦如,张洛桐,谷勇哲,敖雪. 2024

[2]Pooled mapping: an efficient method of calling variations for population samples with low-depth resequencing data. Fu, Lixia,Cai, Chengcheng,Cui, Yinan,Wu, Jian,Liang, Jianli,Cheng, Feng,Wang, Xiaowu.

[3]Biparental Resequencing Coupled With SNP Genotyping of a Segregating Population Offers Insights Into the Landscape of Recombination and Fixed Genomic Regions in Elite Soybean. Li, Ying-hui,Liu, Yu-lin,Liu, Zhang-xiong,Liu, Bo,Chang, Ru-zhen,Qiu, Li-juan,Reif, Jochen C.,Mette, Michael F.. 2014

[4]Resequencing and Signatures of Selective Scans Point to Candidate Genetic Variants for Hair Length Traits in Long-Haired and Normal-Haired Tianzhu White Yak. Qi Bao,Xiaoming Ma,Congjun Jia,Xiaoyun Wu,Yi Wu,Guangyao Meng,Pengjia Bao,Min Chu,Xian Guo,Chunnian Liang,Ping Yan. 2022

[5]Resequencing of global Lotus corniculatus accessions reveals population distribution and genetic loci, associated with cyanogenic glycosides accumulation and growth traits. Cheng Chen,Kaixuan Zhang,Fu Liu,Xia Wang,Yang Yao,Xiaolei Niu,Yuqi He,Jun Hong,Fang Liu,Qiu Gao,Yi Zhang,Yurong Li,Meijuan Wang,Jizhen Lin,Yu Fan,Kui Ren,Lunhao Shen,Bin Gao,Xue Ren,Weifei Yang,Milen I. Georgiev,Xinquan Zhang,Meiliang Zhou. 2023

[6]Genetic Variants in the ATF6 Gene and Their Relationship with Milk-Quality Traits in Yaks. Xiaoming Ma,Xian Guo,Yongfu La,Xiaoyun Wu,Min Chu,Pengjia Bao,Ping Yan,Chunnian Liang. 2025

[7]LncPheDB: a genome-wide lncRNAs regulated phenotypes database in plants. Lou D.,Li F.,Ge J.,Fan W.,Liu Z.,Wang Y.,Huang J.,Xing M.,Guo W.,Wang S.,Qiao W.,Han Z.,Qian Q.,Yang Q.,Zheng X.. 2022

[8]A study using single-locus and multi-locus genome-wide association study to identify genes associated with teat number in Hu sheep. Zhao, Yuhetian,Pu, Yabin,Liang, Benmeng,Bai, Tianyou,Liu, Yue,Jiang, Lin,Ma, Yuehui. 2022

[9]A Genome-Wide Association Study Coupled With a Transcriptomic Analysis Reveals the Genetic Loci and Candidate Genes Governing the Flowering Time in Alfalfa (Medicago sativa L.). He F.,Zhang F.,Jiang X.,Long R.,Wang Z.,Chen Y.,Li M.,Gao T.,Yang T.,Wang C.,Kang J.,Chen L.,Yang Q.. 2022

[10]Transcriptome and GWAS Analyses Reveal Candidate Gene for Root Traits of Alfalfa during Germination under Salt Stress. Fei He,Tianhui Yang,Fan Zhang,Xueqian Jiang,Xianyang Li,Ruicai Long,Xue Wang,Ting Gao,Chuan Wang,Qingchuan Yang,Lin Chen,Junmei Kang. 2023

[11]Genome-Wide Association Study Discovered Favorable Single Nucleotide Poly Morphisms and Candidate Genes Associated with Ramie (Boehmeria Nivea L.) Colloidal Matters. Chen, Kunmei,Ou, Wenjing,Yu, Chunming,Zhu, Aiguo,Luan, Mingbao,Chen, Jikang,Gao, Gang,Wang, Xiaofei, I,Chen, Ping. 2023

[12]The Hoof Color of Australian White Sheep Is Associated with Genetic Variation of the MITF Gene. Peng Su,Hui Wu,Yangming Huang,Xiaofang Lu,Jing Yin,Qingfeng Zhang,Xianyong Lan. 2023

[13]Genome-wide association analysis of salt-tolerant traits in terrestrial cotton at seedling stage. Juyun Zheng,Zeliang Zhang,Zhaolong Gong,Yajun Liang,Zhiwei Sang,Yanchao Xu,Xueyuan Li,Junduo Wang. 2022

[14]Identification of SNPs and Candidate Genes for Milk Production Ability in Yorkshire Pigs. Lijun Shi,Yang Li,Qian Liu,Longchao Zhang,Ligang Wang,Xin Liu,Hongmei Gao,Xinhua Hou,Fuping Zhao,Hua Yan,Lixian Wang. 2021

[15]GWAS unravels acid phosphatase ACP2 as a photosynthesis regulator under phosphate starvation conditions through modulating serine metabolism in rice. Liu, Sushuang,Xu, Zhan,Essemine, Jemaa,Liu, Yanmin,Liu, Chundong,Zhang, Feixue,Iqbal, Zubair,Qu, Mingnan. 2024

[16]Identification of SNPs and INDELS associated with duck egg quality traits through a genome-wide association analysis. Min Zhang,Lizhi Lu,Yan Li,Qiong Wu,Yanhui Liu,Hongfei Liu,Hehe Tang,Rulong Lin,Hongping Chen,Tao Zeng,Yong Tian,Yuting Yan,Yanning Wei,Chenyu Ren,Wenfu Li,Min Liu,Jie Yu,Jiawen Liu,Xin Lin,Guanghua Zeng,Chunmei Cheng,Xiaobing Jiang,Yanfa Sun. 2024

[17]Integrative genome-wide association and haplotype-based analyses reveal genetic structure and local adaptation in Korean landrace soybeans. Eun Gyeong Kim,Myoung Jae Shin,Xiaohan Wang,Yu Mi Choi,Gi An Lee,Eunae Yoo,Jae Eun Lee,Sookyeong Lee,Kebede Taye Desta,Me Sun Kim,Hyeonseok Oh,Jungyoon Yi. 2025

[18]Genetic dissection of plant height in spring wheat from Pakistan using genome-wide SNPs and allele-specific Rht markers. Hafiz Muhammad Suleman,Humaira Qayyum,Sana ur Rehman,Khawar Majeed,Misbah Mukhtar,Saima Zulfiqar,Zahid Mahmood,Abdul Aziz,Muhammad Fayyaz,Ambreen Mehvish,Shuanghe Cao,Awais Rasheed,Zhonghu He. 2025

[19]Uncovering the Genetic Basis of Grain Protein Content and Wet Gluten Content in Common Wheat (Triticum aestivum L.). Song, Quanhao,Cui, Wenwen,Gao, Zhanning,Song, Jiajing,Wang, Shuaishuai,Ma, Hongzhen,Chen, Liang,Xu, Kaijie,Jin, Yan. 2026

[20]“大通”牦牛Lfcin基因克隆及生物信息学分析(英文). 裴杰,阎萍,姬国红,冯瑞林,梁春年,郭宪,曾玉峰,包鹏甲,褚敏. 2009

作者其他论文 更多>>