Complete Genome Sequencing Of Bacillus V.elezensis Wrn014, And Comparison W ith Genome Sequences Of Other Bacillus Velezensis Strains
文献类型: 外文期刊
作者: Wang, JR; Xing, JY; Lu, JK; Sun, YJ; Zhao, JJ; Miao, SH; Xiong, Q; Zhang, YG; Zhang, GS
作者机构:
关键词: Bacillus velezensis; comparative genomics; phylogenetic analysis; gene clusters
期刊名称: JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY
ISSN: 1017-7825
年卷期: 2019 年 29 卷 5 期
页码:
收录情况: JCR(2021版)
摘要: Bacillus velezensis strain WRN014 was isolated from banana fields in Hainan, China. Bacillus velezensis is an important member of the plant growth-promoting rhizobacteria (PGPR) which can enhance plant growth and control soil-borne disease. The complete genome of Bacillus velezensis WRN014 was sequenced by combining Illumina Hiseq 2500 system and Pacific Biosciences SMRT high-throughput sequencing technologies. Then, the genome of Bacillus velezensis WRN014, together with 45 other completed genome sequences of the Bacillus velezensis strains, were comparatively studied. The genome of Bacillus velezensis WRN014 was 4,063,541bp in length and contained 4,062 coding sequences, 9 genomic islands and 13 gene clusters. The results of comparative genomic analysis provide evidence that (i) The 46 Bacillus velezensis strains formed 2 obviously closely related clades in phylogenetic trees. (ii) The pan-genome in this study is open and is increasing with the addition of new sequenced genomes. (iii) Analysis of single nucleotide polymorphisms (SNPs) revealed local diversification of the 46 Bacillus velezensis genomes. Surprisingly, SNPs were not evenly distributed throughout the whole genome. (iv) Analysis of gene clusters revealed that rich gene clusters spread over Bacillus velezensis strains and some gene clusters are conserved in different strains. This study reveals that the strain WRN014 and other Bacillus velezensis strains have potential to be used as PGPR and biopesticide.
分类号:
- 相关文献
作者其他论文 更多>>
-
Gut Microbiota Of Wild And Captive Alpine Musk Deer (Moschus Chrysogaster)
作者:Sun, YW; Sun, YJ; Shi, ZH; Liu, ZS; Zhao, C; Lu, TF; Gao, H; Zhu, F; Chen, R; Zhang, J; Pan, RL; Li, BG; Teng, LW; Guo, ST
关键词:Wild Musk Deer; Gut Microbiota; Short-Chain Fatty Acid; Firmicutes To Bacteroides; Prevotella (F; B) Ratio; Methane
-
Phylodynamic Analysis Of Two Amino Acid Substitutions In The Hemagglutinin Protein Of Canine Distemper Virus Strains Detected In Fur-Bearing Animals In China
作者:Tao, RS; Ba, HX; Chen, J; Liu, MJ; Pan, HJ; Li, X; Wang, QK; Zhao, JJ
关键词:Canine Distemper Virus; H Protein; Sub-Genotype; Bayesian Phylogenetics; Selection Pressure
-
Cellular Microrna, Mir-1343-5P, Modulates Ifn-I Responses To Facilitate Feline Panleukopenia Virus Replication By Directly Targeting Irak1 Gene
作者:Zhang, LL; Zhao, JJ; Zhai, ZA; Liang, L; Liang, RY; Cui, SJ
关键词:Feline Panleukopenia Virus; Mir-1343-5P; Interleukin-1 Receptor-Associated Kinase 1; Type I Interferon; Viral Replication
-
Estimation And Spatio-Temporal Patterns Of Carbon Emissions From Grassland Fires In Inner Mongolia, China
作者:Yu, S; Jiang, L; Du, WL; Zhao, JJ; Zhang, HY; Zhang, QF; Liu, HJ
关键词:Grassland Fires; Surface Fuel Load; Area Burned; Estimation Of Carbon Emissions; Inner Mongolia; China
-
Enhanced Efficacy Of A Multi-Epitope Vaccine For Type A And O Foot-And-Mouth Disease Virus By Fusing Multiple Epitopes With Mycobacterium Tuberculosis Heparin-Binding Hemagglutinin (Hbha), A Novel Tlr4 Agonist
作者:Lei, Y; Shao, JJ; Ma, FF; Lei, CL; Chang, HY; Zhang, YG
关键词:FMDV; HBHA; TLR4 agonist; Multi-epitope vaccine
-
Newcastle Disease Virus Infection Activates Pi3K/Akt/Mtor And P38 Mapk/Mnk1 Pathways To Benefit Viral Mrna Translation Via Interaction Of The Viral Np Protein And Host Eif4E
作者:Zhan, Y; Yu, SQ; Yang, S; Qiu, XS; Meng, CC; Tan, L; Song, CP; Liao, Y; Liu, WW; Sun, YJ; Ding, C
关键词:
-
The Relationships Of Dairy Ruminal Odd- And Branched- Chain Fatty Acids To The Duodenal Bacterial Nitrogen Flow And Volatile Fatty Acids
作者:Liu, KY; Li, Y; Luo, GB; Xin, HS; Zhang, YG; Li, GY
关键词:Rumen odd- and branched-chain fatty acids; Duodenal microbial nitrogen flow; Volatile fatty acids