数字农科院2.0

Extreme genetic signatures of local adaptation in a notorious rice pest, Chilo suppressalis

文献类型： 外文期刊

作者： Peng, Yan;Mao, Kaikai;Li, Hongran;Ping, Junfen;Zhu, Jingyun;Liu, Xinye;Zhang, Zhuting;Jin, Minghui;Wu, Chao;Wang, Nan;Yesaya, Alexander;Wilson, Kenneth;Xiao, Yutao

作者机构：

关键词： （1-1-1）local adaptation;Chilo suppressalis;gene flow;cold tolerance

期刊名称： NATIONAL SCIENCE REVIEW

ISSN： 2095-5138

年卷期： 2024 年

页码：

收录情况： SCIE（2024版） ; ; EI（2024版） ; ; CSCD（2023-2024年度） ; ; 科技核心（2024版）

摘要： Climatic variation stands as a significant driving force behind genetic differentiation and the evolution of adaptive traits. Chilo (C.) suppressalis, commonly known as the rice stem borer, is a highly destructive pest that crucially harms rice production. The lack of natural population genomics data has hindered a more thorough understanding of its climate adaptation, particularly the genetic basis underlying adaptive traits. To overcome this obstacle, our study employed completely resequenced genomes of 384 individuals to explore the population structure, demographic history, and gene flow of C. suppressalis in China. This study observed that its gene flow occurred asymmetrically, moving from central populations to peripheral populations. Using genome-wide selection scans and genotype-environment association studies, we identified potential loci that may be associated with climatic adaptation. The most robust signal was found to be associated with cold tolerance, linked to a homeobox gene, goosecoid (GSC), whose expression level was significantly different in low and high latitudes. Moreover, downregulating the expression of this gene by RNAi enhances its cold tolerance phenotypes. Our findings have uncovered and delved into the genetic foundation of the ability of C. suppressalis to adapt to its environment. This is essential in ensuring the continued effectiveness and sustainability of novel control techniques.

分类号：

  • 相关文献

[1]A New Method To Obtain I.sofemale Lines For Monitoring C hilo Suppressalis Resistance To Bt Toxin. Han, Lanzhi,Chen, Geng,Zhang, Chuan,Luo, Ju,Peng, Yufa. 2019

[2]A Technique For Determining The M.ating Status Of Chilo S uppressalis (Lepidoptera: Crambidae) Males. Fu, Qiang,Fu, Qiang,Dai, Changgeng,Hu, Yang,Zheng, Yongli,Zheng, Yongli,Dai, Changgeng,Zhu, Jinxin,Zhu, Jinxin,Hu, Yang,He, Jiachun,He, Jiachun. 2018

[3]Genetic phylogeography and maternal lineages of 18 Chinese black goat breeds. Zhong, Tao,Wang, Lin Jie,Li, Li,Niu, Li Li,Wang, Jie,Jin, Peng Fei,Zhao, Wei,Zhang, Hong Ping,Zhao, Qian Jun,Ma, Yue Hui. 2013

[4]Gene cloning and expression of aminopeptidase N and cadherin from midgut of the rice stem borer, Chilo suppressalis. Chen, Hao,Zhang, Yong-Jun,Wu, Kong-Ming,Liang, Ge-Mei,Guo, Yu-Yuan,Liu, Ze-Wen. 2010

[5]A large-scale field study of transgene flow from cultivated rice (Oryza sativa) to common wild rice (O-rufipogon) and barnyard grass (Echinochloa crusgalli). Yuan, Qian-Hua,Shi, Lei,Qian, Qian,Liu, Wu-Ge,Kuang, Ba-Geng,Zeng, Da-Li,Liao, Yi-Long,Cao, Bin,Jia, Shi-Rong. 2006

[6]Genetic diversity and gene flow dynamics revealed in the rare mixed populations of wild soybean (Glycine soja) and semi-wild type (Glycine gracilis) in China. Wang, Ke-Jing,Li, Xiang-Hua. 2013

[7]Population Genetic Analysis of the Rice Stem Borer, Chilo suppressalis, in the South China. Hou Mao-lin,Liu Yu-di,Wu Yu-chun,Liu Gui-qin. 2013

[8]Evaluation of transgenic rice expressing Cry1Ac and CpTI against Chilo suppressalis and intrapopulation variation in susceptibility to Cry1Ac. Wu, Kong-Ming,Peng, Yu-Fa,Wang, Feng,Guo, Yu-Yuan. 2006

[9]Multilocus genotypic data reveal high genetic diversity and low population genetic structure of Iranian indigenous sheep. Vahidi, S. M. F.,Afraz, F.,Mousavi, S. M.,Faruque, M. O.,Anbaran, M. Falahati,Anbaran, M. Falahati,Boettcher, P.,Joost, S.,Han, J. L.,Colli, L.,Periasamy, K.,Negrini, R..

[10]RNAi in the striped stem borer, Chilo suppressalis, establishes a functional role for aminopeptidase N in Cry1Ab intoxication. Du, L. X.,Liu, C. X.,Han, L. Z.,Peng, Y. F.,Gong, L..

[11]Comparison of three transgenic Bt rice lines for insecticidal protein expression and resistance against a target pest, Chilo suppressalis (Lepidoptera: Crambidae). Ke, Kai-Qie,Li, Yun-He,Han, Lan-Zhi,Liu, Yan-Min,Peng, Yu-Fa,Ke, Kai-Qie,Hua, Hong-Xia. 2016

[12]High gene flows promote close genetic relationship among fine wool sheep populations (Ovis aries) in China. Han Ji-long,Guo Ting-ting,Liu Jian-bin,Niu Chun-e,Yuan Chao,Yue Yao-jing,Yang Bo-hui,Yang Min. 2016

[13]Analysis of genetic diversity among different geographic populations of Athetis lepigone using ISSR molecular markers. Ahmed, Tofael,Liu, Yu-juan,He, Kang-lai,Wang, Zhen-ying,Wang, Zhen-ying.

[14]Exposure to mild temperatures decreases overwintering larval survival and post-diapause reproductive potential in the rice stem borer Chilo suppressalis. Chen, Junhui,Chen, Liyuan,Chen, Chao,Xiao, Haijun,Wu, Shaohui.

[15]Influence of soil moisture on supercooling capacity and associated physiological parameters of overwintering larvae of rice stem borer. Han, Yongqiang,Lin, Wei.

[16]Linked vs. unlinked markers: multilocus microsatellite haplotype-sharing as a tool to estimate gene flow and introgression. Koopman, Wim J. M.,Li, Yinghui,Coart, Els,De Weg, Eric Van,Vosman, Ben,Roldan-Ruiz, Isabel,Smulders, Marinus J. M..

[17]Mitogenomic Meta-Analysis Identifies Two Phases of Migration in the History of Eastern Eurasian Sheep. Lv, Feng-Hua,Peng, Wei-Feng,Yang, Ji,Zhao, Yong-Xin,Yang, Guang-Li,Li, Meng-Hua,Peng, Wei-Feng,Zhao, Yong-Xin,Li, Wen-Rong,Liu, Ming-Jun,Ma, Yue-Hui,Zhao, Qian-Jun,Gorkhali, Neena A.,Han, Jian-Lin,Yang, Guang-Li,Wang, Feng,Li, Jin-Quan,Liu, Yong-Gang,Shen, Zhi-Qiang,Zhao, Sheng-Guo,EEr Hehua,Gorkhali, Neena A.,Vahidi, S. M. Farhad,Muladno, Muhammad,Naqvi, Arifa N.,Tabell, Jonna,Iso-Touru, Terhi,Bruford, Michael W.,Kantanen, Juha,Han, Jian-Lin.

[18]The phylogeographic system survey of native sheep breeds in the eastern and southern Central Asia. Sun, W.,Ma, Y. H.,Guan, W. J.,Sun, W.,Chang, H.,Musa, H. H.,Yang, Z. P.,Tsunoda, K.,Musa, H. H..

[19]Evidence of genetic recombination in wheat yellow rust populations of a Chinese oversummering area. Mboup, M.,Leconte, M.,Gautier, A.,de Vallavieille-Pope, C.,Enjalbert, J.,Wan, A. M.,Chen, W.,Wan, A. M..

[20]Assessment of cattle genetic introgression into domestic yak populations using mitochondrial and microsatellite DNA markers. Qi, X. B.,Jianlin, H.,Rege, J. E. O.,Hanotte, O.,Qi, X. B.,Jianlin, H.,Wang, G.,Hanotte, O..

作者其他论文 更多>>