[1]A Graph-based Goat Pangenome Reveals Structural Variations Involved in Domestication and Adaptation. Bian, Peipei,Li, Jiaxin,Zhou, Shishuo,Wang, Xingquan,Gong, Mian,Guo, Xi,Cai, Yudong,Yang, Qimeng,Fu, Jiaqi,Li, Rongrong,Huang, Shuhong,Luo, Funong,Shah, Ali Mujtaba,Lenstra, Johannes A.,Mwacharo, Joram M.,Li, Ran,Ren, Gang,Wang, Xiaolong,Li, Cong,Zheng, Wenxin,Jiang, Yu,Wang, Xihong. 2024

[2]Comprehensive analysis of structural variants in chickens using PacBio sequencing. Zhang J.,Nie C.,Li X.,Zhao X.,Jia Y.,Han J.,Chen Y.,Wang L.,Lv X.,Yang W.,Li K.,Zhang J.,Ning Z.,Bao H.,Zhao C.,Li J.,Qu L.. 2022

[3]Genome-wide detection of structural variation in some sheep breeds using whole-genome long-read sequencing data. Qiao, Guoyan,Xu, Pan,Guo, Tingting,He, Xue,Yue, Yaojing,Yang, Bohui. 2024

[4]Landscape of structural variants reveals insights for local adaptations in the Asian corn borer. Yan Peng,Kaikai Mao,Zhuting Zhang,Junfen Ping,Minghui Jin,Xinye Liu,Chao Wu,Chongjun Zhao,Peng Wang,Xueqing Duan,Songmiao Yu,Zhimin Li,Jimin Liu,Hongran Li,Alexander Yesaya,Lin Chen,Hongru Wang,Kenneth Wilson,Yutao Xiao. 2024

[5]The evolutionary dynamics of organellar pan-genomes in Arabidopsis thaliana. Yi Zou,Weidong Zhu,Yingke Hou,Daniel B. Sloan,Zhiqiang Wu. 2025

[6]Improving the Completeness of Chromosome-Level Assembly by Recalling Sequences from Lost Contigs. Junyang Liu,Fang Liu,Weihua Pan. 2023

[7]GAEP: a comprehensive genome assembly evaluating pipeline. Zhang, Yong,Lu, Hong-Wei,Ruan, Jue. 2023

[8]High-Quality Genomes of Pangolins: Insights into the Molecular Basis of Scale Formation and Adaption to Myrmecophagous Diet. Yan D.,Luo X.,Tang J.,Xu S.,Huang K.,Wang X.,Feng T.,Que T.,Jia M.,Guo X.,Rehman S.U.,Li Z.,Yang Y.,Li K.,Cui K.,Ruan J.,Liu Q.. 2023

[9]The discovery of a key prenyltransferase gene assisted by a chromosome-level Epimedium pubescens genome. Guoan Shen,Yanjiao Luo,Yu Yao,Guoqing Meng,Yixin Zhang,Yuanyue Wang,Chaoqun Xu,Xiang Liu,Cheng Zhang,Gang Ding,Yongzhen Pang,Hui Zhang,Baolin Guo. 2022

[10]Chromosome-scale genome assembly-assisted identification of Mi-9 gene in Solanum arcanum accession LA2157, conferring heat-stable resistance to Meloidogyne incognita. Jiang, Lijun,Ling, Jian,Zhao, Jianlong,Yang, Yu,Yang, Yuhong,Li, Yan,Jiao, Yang,Mao, Zhenchuan,Wang, Yunsheng,Xie, Bingyan. 2023

[11]Transposon insertions regulate genome-wide allele-specific expression and underpin flower colour variations in apple (Malus spp.). Tian, Yi,Thrimawithana, Amali,Ding, Tiyu,Guo, Jian,Gleave, Andrew,Chagne, David,Ampomah-Dwamena, Charles,Ireland, Hilary S.,Schaffer, Robert J.,Luo, Zhiwei,Wang, Meili,An, Xiuhong,Wang, Dajiang,Gao, Yuan,Wang, Kun,Zhang, Hengtao,Zhang, Ruiping,Zhou, Zhe,Yan, Zhenli,Zhang, Liyi,Zhang, Caixia,Cong, Peihua,Deng, Cecilia H.,Yao, Jia-Long. 2022

[12]An Improved Genome Sequence Resource of Bipolaris maydis, Causal Agent of Southern Corn Leaf Blight. Wang, Yafei,Kang, Houxiang,Yao, Jinai,Li, Zhiqiang,Xia, Xinyao,Zhou, Shaoqun,Liu, Wende. 2022

[13]The Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family. Lei Wang,Liqiang Fan,Zhenyong Zhao,Zhibin Zhang,Li Jiang,Mao Chai,Changyan Tian. 2022

[14]Genome assembly of the Chinese maize elite inbred line RP125 and its EMS mutant collection provide new resources for maize genetics research and crop improvement. Shujun Nie,Bo Wang,Haiping Ding,Haijian Lin,Li Zhang,Qigui Li,Yujiao Wang,Bin Zhang,Anping Liang,Qi Zheng,Hui Wang,Huayang Lv,Kun Zhu,Minghui Jia,Xiaotong Wang,Jiyuan Du,Runtai Zhao,Zhenzhen Jiang,Caina Xia,Zhenghao Qiao,Xiaohu Li,Boyan Liu,Hongbo Zhu,Rong An,Yucui Li,Qian Jiang,Benfang Chen,Hongkai Zhang,Dening Wang,Changxiao Tang,Yang Yuan,Jie Dai,Jing Zhan,Weiqiang He,Xuebo Wang,Jian Shi,Bin Wang,Min Gong,Xiujing He,Peng Li,Li Huang,Hui Li,Chao Pan,Hong Huang,Guangsheng Yuan,Hai Lan,Yongxin Nie,Xinzheng Li,Xiangyu Zhao,Xiansheng Zhang,Guangtang Pan,Qingyu Wu,Fang Xu,Zhiming Zhang. 2021

[15]Compared analysis with a high-quality genome of weedy rice reveals the evolutionary game of de-domestication. Jie Ma,Hua Wei,Xiaoman Yu,Yang Lv,Yu Zhang,Qian Qian,Lianguang Shang,Longbiao Guo. 2022

[16]Chromosome-level genome assembly of the Muscovy duck provides insight into fatty liver susceptibility. Xu M.-M.,Gu L.-H.,Lv W.-Y.,Duan S.-C.,Li L.-W.,Du Y.,Lu L.-Z.,Zeng T.,Hou Z.-C.,Ma Z.S.,Chen W.,Adeola A.C.,Han J.-L.,Xu T.-S.,Dong Y.,Zhang Y.-P.,Peng M.-S.. 2022

[17]The genome of Orychophragmus violaceus provides genomic insights into the evolution of Brassicaceae polyploidization and its distinct traits. Zhang, Kang,Yang, Yinqing,Zhang, Xin,Zhang, Lingkui,Fu, Yu,Guo, Zhongwei,Chen, Shumin,Wu, Jian,Schnable, James C.,Yi, Keke,Wang, Xiaowu,Cheng, Feng. 2023

[18]A chromosome-level genome assembly of the potato grouper (Epinephelus tukula). Wang L.,Li Z.,Liu Y.,Chen S.,Li L.,Duan P.,Wang X.,Li W.,Wang Q.,Zhai J.,Tian Y.. 2022

[19]A comprehensive overview of cotton genomics, biotechnology and molecular biological studies. Wen, Xingpeng,Chen, Zhiwen,Yang, Zuoren,Wang, Maojun,Jin, Shuangxia,Wang, Guangda,Zhang, Li,Wang, Lingjian,Li, Jianying,Saeed, Sumbul,He, Shoupu,Wang, Zhi,Wang, Kun,Kong, Zhaosheng,Li, Fuguang,Zhang, Xianlong,Chen, Xiaoya,Zhu, Yuxian. 2023

[20]Genome Assembly of Alfalfa Cultivar Zhongmu-4 and Identification of SNPs Associated with Agronomic Traits. Ruicai Long,Fan Zhang,Zhiwu Zhang,Mingna Li,Lin Chen,Xue Wang,Wenwen Liu,Tiejun Zhang,Long Xi Yu,Fei He,Xueqian Jiang,Xijiang Yang,Changfu Yang,Zhen Wang,Junmei Kang,Qingchuan Yang. 2022