数字农科院2.0

RNA-seq unveils pathways for drought and salinity resilience in Egyptian rice Sakha 102

文献类型： 外文期刊

作者： Hazman, Mohamed;Guo, Longbiao;Tong, Hanhua;Fawzy, Samer;Anis, Galal;Elsherif, Ahmed;Riemann, Michael;Nick, Peter

作者机构：

关键词： Rice;Drought;Salinity;RNA-seq

期刊名称： PLANT GROWTH REGULATION

ISSN： 0167-6903

年卷期： 2025 年

页码：

收录情况： SCIE（2025版）

摘要： Refining stress-specific and communal adaptive mechanisms for drought and salinity is fundamental for developing resilient rice lines efficiently adapting arid or semi-amid agroecosystems. RNAseq profiling of Egyptian rice cultivar Sakha 102 seedlings subjected to osmo-equivalent doses of mannitol and NaCl showed a 24.7% overlap in differentially expressed genes (DEGs) between osmotic and salinity stresses, with 47% of DEGs unique to osmotic stress and 3.6% specific to salinity. Drought specifically upregulates genes like hexokinase I (involved in sugar sensing) and leaf trichome cell wall strengthening, whereas salinity stress activates signaling genes, including Cysteine-Rich Receptor-Like Protein Kinases and the cytoplasmic kinase RLCK223. Additionally, both stresses induce common genes such as chlorine channel I and inorganic phosphate transporter 1-5. Importantly, the downregulated genes network seemed to offer valuable complementary strategies focusing on the prioritizing of certain adaptive energy-trade off mechanism over growth. We proposed a model illustrating some distinct and overlapping molecular adaptive responses in the rice cultivar Sakha 102. We propose considering suggested results to improve stress-specific breeding and precision genome editing programs (ex: CRISPR-base genome editing) for developing efficient stress-resilient rice varieties.

分类号：

  • 相关文献

[1]Recurrent selection breeding by dominant male sterility for multiple abiotic stresses tolerant rice cultivars. Pang, Yunlong,Wang, Xiaoqian,Xu, Jianlong,Li, Zhikang,Pang, Yunlong,Wang, Xiaoqian,Ali, Jauhar,Pang, Yunlong,Chen, Kai,Xu, Jianlong,Xu, Jianlong,Li, Zhikang.

[2]The comparative transcriptome analysis of two green super rice genotypes with varying tolerance to salt stress. Zahra, Nageen,Uzair, Muhammad,Zaid, Imdad Ullah,Attia, Kotb A.,Inam, Safeena,Fiaz, Sajid,Abdallah, Rizk M.,Naeem, Muhammad Kashif,Farooq, Umer,Rehman, Nazia,Ali, Ghulam Muhammad,Xu, Jianlong,Li, Zhikang,Khan, Muhammad Ramzan. 2024

[3]Identification and characterization of hemp WRKY transcription factors in response to abiotic stresses. Zhao, L. -N.,Zang, G. -G..

[4]Recent progress in drought and salt tolerance studies in Brassica crops. Zhang, Xuekun,Lu, Guangyuan,Long, Weihua,Zou, Xiling,Li, Feng,Long, Weihua,Nishio, Takeshi.

[5]Effect of soil salinity, soil drought, and their combined action on the biochemical characteristics of cotton roots. Chen, Binglin,Zhang, Guowei,Li, Jianliang,Wang, Youhua,Meng, Yali,Zhou, Zhiguo,Zhang, Lei. 2013

[6]Expression of TERF1 in rice regulates expression of stress-responsive genes and enhances tolerance to drought and high-salinity. Gao, Shumei,Zhang, Haiwen,Tian, Yun,Li, Fang,Zhang, Zhijin,Chen, Xiaoliang,Huang, Rongfeng,Gao, Shumei,Zhang, Haiwen,Zhang, Zhijin,Huang, Rongfeng,Tian, Yun,Li, Fang,Lu, Xiangyang. 2008

[7]Transcriptome-wide characterization and functional analysis of Xyloglucan endo-transglycosylase/hydrolase (XTH) gene family of Salicornia europaea L. under salinity and drought stress. Richard John Tiika,Jia Wei,Guangxin Cui,Yanjun Ma,Hongshan Yang,Huirong Duan. 2021

[8]Transcription factors interact with ABA through gene expression and signaling pathways to mitigate drought and salinity stress. Quaid Hussain,Muhammad Asim,Rui Zhang,Rayyan Khan,Saqib Farooq,Jiasheng Wu. 2021

[9]Exploring the nano-wonders: unveiling the role of Nanoparticles in enhancing salinity and drought tolerance in plants. Rehman, Abdul,Khan, Sana,Sun, Fenlei,Peng, Zhen,Feng, Keyun,Wang, Ning,Jia, Yinhua,Pan, Zhaoe,He, Shoupu,Wang, Lidong,Qayyum, Abdul,Du, Xiongming,Li, Hongge. 2024

[10]Deciphering the Role of Nanoparticles in Stimulating Drought and Salinity Tolerance in Plants: Recent Insights and Perspective. Ain, Qurat ul,Hussain, Hafiz Athar,Zhang, Qingwen,Kamal, Farah,Charagh, Sidra,Imran, Asma,Hussain, Saddam,Bibi, Huzaima. 2024

[11]Decoding Peanut Root Adaptation to Combined Environmental Stresses: Challenging the Single-Stress Paradigm. Yohannes Gelaye,Sintayehu Musie,Yebirzaf Yeshiwas,Melkamu Workineh,Alemayehu Tilahun,Mastewal Alehegn,Tsegaye Chalachew,Abayneh Melkie,Abayneh Wubetu,Yalemtesfa Firew,Tadele Fanos,Hirut Kefale,Hewan Lema,Rahel Demes,Alshamget Workineh,Tadessu Wagnew,Bezawit Yikeber,Yibeltal Wubetie,Alachew Wale,Balewken Atinaf,Ayehu Chekol,Huaiyong Luo. 2026

[12]水稻淡褐斑叶突变体lbsll的遗传分析与基因定位. 奉保华,杨杨,施勇烽,林璐,陈洁,黄奇娜,魏彦林,HeiLEUNG,吴建利. 2012

[13]OsBTF3转基因水稻对病原茵侵染的反应和防卫基因的表达分析. 陈华民,吴茂森,何晨阳. 2012

[14]Transcriptome and functional analyses reveal ERF053 from Medicago falcata as key regulator in drought resistances. Li Q.,Jiang W.,Jiang Z.,Du W.,Song J.,Qiang Z.,Zhang B.,Pang Y.,Wang Y.. 2022

[15]Response of Multiple Tissues to Drought Revealed by a Weighted Gene Co-Expression Network Analysis in Foxtail Millet [Setaria italica (L.) P. Beauv.]. Renliang Zhang,Hui Zhi,Yuhui Li,Erhu Guo,Guojun Feng,Sha Tang,Weixia Guo,Linlin Zhang,Guanqing Jia,Xianmin Diao. 2022

[16]Identification of QTL and candidate genes associated with biomass yield and Feed Quality in response to water deficit in alfalfa (Medicago sativa L.) using linkage mapping and RNA-Seq. Xueqian Jiang,Andong Yu,Fan Zhang,Tianhui Yang,Chuan Wang,Ting Gao,Qingchuan Yang,Long Xi Yu,Zhen Wang,Junmei Kang. 2022

[17]Improvement of rice drought tolerance through backcross breeding: Evaluation of donors and selection in drought nurseries. Lafitte, HR,Li, ZK,Vijayakumar, CHM,Gao, YM,Shi, Y,Xu, JL,Fu, BY,Ali, AJ,Domingo, J,Maghirang, R,Torres, R,Mackill, D. 2006

[18]Leucine-Rich Repeat Receptor-Like Kinase FON1 Regulates Drought Stress and Seed Germination by Activating the Expression of ABA-Responsive Genes in Rice. Feng, Lei,Gao, Zhenrui,Xiao, Guiqing,Huang, Rongfeng,Zhang, Haiwen,Huang, Rongfeng,Zhang, Haiwen.

[19]Functional analyses of ethylene response factor JERF3 with the aim of improving tolerance to drought and osmotic stress in transgenic rice. Zhang, Haiwen,Liu, Wu,Wan, Liyun,Li, Fang,Zhang, Zhijin,Huang, Rongfeng,Liu, Wu,Li, Fang,Dai, Liangying,Li, Dingjun,Zhang, Haiwen,Zhang, Zhijin,Huang, Rongfeng,Zhang, Haiwen,Zhang, Zhijin,Huang, Rongfeng. 2010

[20]Drought stress in rice: morpho-physiological and molecular responses and marker-assisted breeding. Hassan, Muhammad A.,Ni, Dahu,Tong, Hongning,Qian, Zhu,Yi, Yueming,Li, Yiru,Wang, Shimei. 2023

作者其他论文 更多>>