数字农科院2.0

Identification of genetic loci associated with growth traits at weaning in yak through a genome-wide association study

文献类型: 外文期刊

作者: Yan, P.;Liang, C.;Zan, L.;Jia, C.;Wang, H.;Li, C.;Jia, C.;Chu, M.;Fu, D.

作者机构:

关键词: Candidate Gene; Growth-Related Traits; Multilocus Gwas; Yak

期刊名称: Animal Genetics

ISSN: 1049-5398

年卷期: 2020 年 51 卷 2 期

页码:

收录情况: JCR(2021版) ; EI(2021版)

摘要: A multilocus GWAS was performed to explore the genetic architecture of four growth traits in yak. In total, 354 female yaks for which measurements of body weight (BW), withers height (WH), body length (BL) and chest girth (CG) at weaning were available underwent genotyping with the Illumina BovineHD BeadChip (770K). After quality control, we retained 98 688 SNPs and 354 animals for GWAS analysis. We identified seven, 18, seven and nine SNPs (corresponding to seven, 17, seven and eight candidate genes) associated with BW, WH, BL and CG at weaning respectively. Interestingly, most of these candidate genes were reported to be involved in growth-related processes such as muscle formation, lipid deposition, feed efficiency, carcass composition and development of the central and peripheral nervous system. Our results offer novel insight into the molecular architecture underpinning yak growth traits. Further functional analyses are thus warranted to explore the molecular mechanisms whereby these genes affect these traits of interest.

分类号:

  • 相关文献

[1]Gwas Analysis And Qtl Identification O.f Fiber Quality Traits A nd Yield Components In Upland Cotton Using Enriched High-Density Snp Markers. Pan, Jingtao,Xiao, Xianghui,Gong, Juwu,Deng, Xiaoying,Zhang, Qi,Jiang, Xiao,Duan, Li,Liu, Aiying,Zou, Xianyan,Hafeez, Abdul,Liu, Ruixian,Zhang, Zhen,Lu, Quanwei,Li, Junwen,Gong, Juwu,Yuan, Youlu,Wankui Gong,Lu, Quanwei,Liu, Ruixian,Xiao, Xianghui,Chen, Quanjia,Shi, Yuzhen,Shang, Haihong,Li, Shaoqi,Iqbal, Muhammad S.,Geng, Hongwei,Yuan, Youlu,Ge, Qun. 2018

[2]Copy Number Variation Of The Cadm2 Gene And Its Association With Growth Traits In Yak. Ge, Fei,Yan, Ping,Liang, Chunnian,Chu, Min,Jia, Congjun. 2019

[3]Prevalence Of Gastrointestinal Parasites In Free-Range Yaks (Bos Grunniens) In Gansu Province, Northwest China. Qin, SY, Yin, MY, Song, GY, Tan, QD, Wang, JL, Zhou, DH. 2019

[4]Identification Of Meat From Yak A.nd Cattle Using Snp M arkers With Integrated Allele-Specific Polymerase Chain Reaction-Capillary Electrophoresis Method. Zhao, J, Xu, ZZ, Chen, AL, You, XY, Zhao, Y, He, WJ, Zhao, LY, Yang, SM. 2019

[5]Seroprevalence And Risk Factors Of F.ascioliasis In Yaks, Bos G runniens, From Three Counties Of Gansu Province, China. Zhang, XX, Feng, SY, Ma, JG, Zheng, WB, Yin, MY, Qin, SY, Zhou, DH, Zhao, Q, Zhu, XQ. 2017

[6]First Report Of Mycobacterium Avium S.ubspecies Paratuberculosis Infection In Y aks (Bos Mutus) In Gansu Province, China. Ma, JG, Zhou, DH, Zheng, WB, Zhang, XX, Zou, Y, Hu, GX, Du, R. 2018

[7]Copy number variation (CNV) of the AHR gene in the Ashidan yak and its association with growth traits. Dai R., Huang C., Wu X., Ma X., Chu M., Bao P., Pei J., Guo X., Yan P., Liang C.. 2022

[8]Seroprevalence of Chlamydia abortus infection in yak (Bos grunniens) in Tibet, China. Liang, Lin,Wen, Yuan,Li, Zhaocai,Liu, Ping,Liu, Xing,Tan, Shuming,Liu, Donghui,Zhou, Jizhang,Tong, Dewen. 2021

[9]Characterization Of The Complete Mitochondrial G.enome Of The Pamir Y ak (Bos Grunniens). Guo, X, Wu, XY, Chu, M, Bao, PJ, Xiong, L, Liang, CN, Ding, XZ, Pei, J, Yan, P. 2019

[10]A chromosome‐scale reference genome and genome‐wide genetic variations elucidate adaptation in yak. Qiu‐mei Ji,Jin‐wei Xin,Zhi‐xin Chai,Cheng‐fu Zhang,Yangla Dawa,Sang Luo,Qiang Zhang,Zhandui Pingcuo,Min‐Sheng Peng,Yong Zhu,Han‐wen Cao,Hui Wang,Jian‐lin Han,Jin‐cheng Zhong. 2021

[11]Effect Of Slow-Release Urea On T.he Composition Of Ruminal B acteria And Fungi Communities In Yak. Yan, XT, Yan, BY, Ren, QM, Dou, JJ, Wang, WW, Zhang, JJ, Zhou, JW, Long, RJ, Ding, LM, Han, J, Li, ZP, Qiu, Q. 2018

[12]Morphometric Evaluation of Spermatogenic Cells and Seminiferous Tubules and Exploration of Luteinizing Hormone Beta Polypeptide in Testis of Datong Yak. Bao, Pengjia,Ding, Xuezhi,Wu, Xiaoyun,Yan, Ping,Ahmad, Anum Ali,Kalwar, Qudratullah,Ahmad, Anum Ali,Kalwar, Qudratullah,Chu, Min. 2020

[13]The seasonal development dynamics of the yak hair cycle transcriptome. Bao, Pengjia,Bao, Pengjia,Luo, Jiayu,Pan, Heping,Qiu, Qiang,Chu, Min,Chu, Min,Liu, Yanbin,Wang, Kun,Guo, Xian,Guo, Xian,Ren, Qingmiao,Ding, Xuezhi,Ding, Xuezhi,Tang, Bolin,Yan, Ping,Qiu, Qiang,Yan, Ping. 2020

[14]Seroprevalence and associated risk factors of Toxoplasma gondii infection in yaks (Bos grunniens) on the Qinghai-Tibetan Plateau of China. Sun Tao,Rahman Sajid Ur,Cai Jinzhong,Zeng Jiangyong,Mi Rongsheng,Zhang Yehua,Gong Haiyan,Ma Hongcai,Huang Yan,Han Xiangan,Zhao Quan,Chen Zhaoguo. 2021

[15]First Detection and Molecular Identification of Entamoeba in Yaks from China. Mei Ren,Fan Yang,Jing-min Gou,Pin-xue Wang,Min Zou,Xiao-hong Zhong,Qing Lin. 2021

[16]Meta-analysis and candidate gene mining of low-phosphorus tolerance in maize. Zhang, Hongwei,Uddin, Mohammed Shalim,Zou, Cheng,Xie, Chuanxiao,Xu, Yunbi,Li, Wen-Xue,Uddin, Mohammed Shalim,Xu, Yunbi. 2014

[17]Genome-wide study refines the quantitative trait locus for number of ribs in a Large White x Minzhu intercross pig population and reveals a new candidate gene. Zhang, Long-Chao,Yue, Jing-Wei,Pu, Lei,Wang, Li-Gang,Liu, Xin,Liang, Jing,Yan, Hua,Zhao, Ke-Bin,Li, Na,Shi, Hui-Bi,Zhang, Yue-Bo,Wang, Li-Xian.

[18]Joint-linkage mapping and GWAS reveal extensive genetic loci that regulate male inflorescence size in maize. Wu, Xun,Li, Yongxiang,Shi, Yunsu,Song, Yanchun,Zhang, Dengfeng,Li, Chunhui,Li, Yu,Wang, Tianyu,Buckler, Edward S.,Buckler, Edward S.,Zhang, Zhiwu,Wu, Xun,Zhang, Zhiwu.

[19]Quantitative trait loci for the number of vertebrae on Sus scrofa chromosomes 1 and 7 independently influence the numbers of thoracic and lumbar vertebrae in pigs. Zhang Long-chao,Liu Xin,Liang Jing,Yan Hua,Zhao Ke-bin,Li Na,Pu Lei,Shi Hui-bi,Zhang Yue-bo,Wang Li-gang,Wang Li-xian. 2015

[20]Numerous genetic loci identified for drought tolerance in the maize nested association mapping populations. Li, Chunhui,Li, Yongxiang,Wu, Xun,Zhang, Dengfeng,Shi, Yunsu,Song, Yanchun,Wang, Tianyu,Li, Yu,Sun, Baocheng,Liu, Cheng,Buckler, Edward S.,Buckler, Edward S.,Zhang, Zhiwu. 2016

作者其他论文 更多>>