数字农科院2.0

Identification of Drought-Resistant Genes in Shanlan Upland Rice

文献类型： 外文期刊

作者： Xiaoling Niu;Nanxin Zhai;Xinsen Yang;Meng Su;Caiyue Liu;Liu Wang;Pengzheng Qu;Wuge Liu;Qianhua Yuan;Xinwu Pei

作者机构：

关键词： Drought resistant gene;RNA-seq;Shanlan upland rice

期刊名称： Agriculture (Switzerland)

ISSN： 2077-0472

年卷期： 2022 年 12 卷 2 期

页码：

收录情况： JCR（2021版）

摘要： Shanlan upland rice is a kind of upland rice and is suitable for planting in the mountains and in hilly terrain. It is mainly found in China’s Hainan province. To discover the drought-resistant genes in Shanlan upland rice, two representative varieties—Baishanuo (BSN) and Dongfang Manpoxiang (MPX)—were selected for transcriptome sequencing, after which gene expression analysis was used to confirm their gene expression patterns. The results demonstrated that 2791 and 829 differentially expressed genes (DEGs) were identified for each variety, including 184 and 58 transcriptional factors, respectively. Expression analysis demonstrated that some genes with unknown functions, such as Os10g0505900, were highly expressed under drought stress treatment. The transcriptomic data and digital gene expression profiling data obtained in this study provide a basis for studying the drought-resistant mechanism in Shanlan upland rice.

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