数字农科院2.0

Resequencing of global Lotus corniculatus accessions reveals population distribution and genetic loci, associated with cyanogenic glycosides accumulation and growth traits

文献类型： 外文期刊

作者： Cheng Chen;Kaixuan Zhang;Fu Liu;Xia Wang;Yang Yao;Xiaolei Niu;Yuqi He;Jun Hong;Fang Liu;Qiu Gao;Yi Zhang;Yurong Li;Meijuan Wang;Jizhen Lin;Yu Fan;Kui Ren;Lunhao Shen;Bin Gao;Xue Ren;Weifei Yang;Milen I. Georgiev;Xinquan Zhang;Meiliang Zhou

作者机构：

关键词： Cyanogenic glycosides;Genomic variation;Growth traits;GWAS;Lotus corniculatus;Population structure;Resequencing

期刊名称： BMC Biology

ISSN： 1741-7007

年卷期： 2023 年 21 卷 1 期

页码：

收录情况： SCIE（2023版）

摘要： Background: Lotus corniculatus is a widely distributed perennial legume whose great adaptability to different environments and resistance to barrenness make it an excellent forage and ecological restoration plant. However, its molecular genetics and genomic relationships among populations are yet to be uncovered. Result: Here we report on a genomic variation map from worldwide 272 L. corniculatus accessions by genome resequencing. Our analysis suggests that L. corniculatus accessions have high genetic diversity and could be further divided into three subgroups, with the genetic diversity centers were located in Transcaucasia. Several candidate genes and SNP site associated with CNglcs content and growth traits were identified by genome-wide associated study (GWAS). A non-synonymous in LjMTR was responsible for the decreased expression of CNglcs synthesis genes and LjZCD was verified to positively regulate CNglcs synthesis gene CYP79D3. The LjZCB and an SNP in LjZCA promoter were confirmed to be involved in plant growth. Conclusion: This study provided a large number of genomic resources and described genetic relationship and population structure among different accessions. Moreover, we attempt to provide insights into the molecular studies and breeding of CNglcs and growth traits in L. corniculatus.

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